Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g2876 ATGTTTACGTGCATAGCGTGTACGAAGACGGATGATAGGGATGAAGAAGGAGGAGTCCGTGAGAGTGGCACGCCGAGTACAAAAGAAGCTGTCAAAAGCCTGACCACACAGATAAAGGATATGGCACTAAAGTTTTCAGGTGCTTACAAACAATGCAAACCCTGCACAGGGTCCAGTAGCTACAAGAAAGGACATAGACCATATCCAGACTTCGATACCATCTCAGAAGGGGTTCCATACCCTTATATTGGGGGTGCAAGCTCAAGTTCAACCCCCGCTTGGGACTTCACAACCTCTCACTACCCTAGTGGTAGATCAGACCCACGATTTGCTGGGGCATTTGGTGGTGACCGCACCCCTAGAGGACGTGACTCGGCGTCAGTTTGTGATGTAGTCTTAGAGGACGAGGATGAGCCTAAGGAGTGGATGGCAGTGGTGGAACCAGGGGTTAACATTACTTTTGTGTCTCTTCCTAATGGGGGAAATGATCTTAAAAGAATTCGCTTCAGCCGAGAGATGTTTAATAAATGGCAAGCGCAAAGATGGTGGGGTGAGAATTACGACAGAATCATGGAACTTTATAACGTACAGAGATTTAATCGACAGGCACTCAACACTCCTCCGAGGTCTGAGGACGAGCCAAGAGATTCTACCTACTCAAGATTGACATCTGCACAGGAAAGTCCCATGGCCTCAAACAAGGATTGGACCCCCAGGAGTCACTATAAACCTTCTGGGAGCAGAGGATATTACCCCTCTGAAGCGTTGGATCATGGTGAAGGTGGTGGGCCATCCATGGAACCAGCAAGGGATACCACTGCTTCTAGAGATGAGCCTTCTATTAGCAATGCCAGTGAAATGGAGGCAGAATGGGTAGAACAAGACGAGCCTGGAGTTTACATTACAATCCGGCAGTTAGCTGATGGGACAAGGGAGCTTCGACGTGTCAGATTCAGCCGGGAAAGATTTGGTGAGGTGAATGCAAAAACATGGTGGGAAGAAAACAGAGAGAGAATACAAGCTCAATACCTTTGA 1035 0.4802 MFTCIACTKTDDRDEEGGVRESGTPSTKEAVKSLTTQIKDMALKFSGAYKQCKPCTGSSSYKKGHRPYPDFDTISEGVPYPYIGGASSSSTPAWDFTTSHYPSGRSDPRFAGAFGGDRTPRGRDSASVCDVVLEDEDEPKEWMAVVEPGVNITFVSLPNGGNDLKRIRFSREMFNKWQAQRWWGENYDRIMELYNVQRFNRQALNTPPRSEDEPRDSTYSRLTSAQESPMASNKDWTPRSHYKPSGSRGYYPSEALDHGEGGGPSMEPARDTTASRDEPSISNASEMEAEWVEQDEPGVYITIRQLADGTRELRRVRFSRERFGEVNAKTWWEENRERIQAQYL* 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g2876 344 MobiDBLite consensus disorder prediction 219 240 - -
Pvu3g2876 344 ProSiteProfiles BRX domain profile. 140 195 IPR013591 -
Pvu3g2876 344 PANTHER PROTEIN BREVIS RADIX-LIKE 1 1 344 IPR044532 -
Pvu3g2876 344 MobiDBLite consensus disorder prediction 204 293 - -
Pvu3g2876 344 ProSiteProfiles BRX domain profile. 289 344 IPR013591 -
Pvu3g2876 344 Pfam Transcription factor BRX N-terminal domain 22 55 IPR027988 -
Pvu3g2876 344 PANTHER BREVIS RADIX-LIKE PROTEIN-RELATED 1 344 - -
Pvu3g2876 344 Pfam Transcription factor regulating root and shoot growth via Pin3 288 343 IPR013591 -
Pvu3g2876 344 Pfam Transcription factor regulating root and shoot growth via Pin3 140 194 IPR013591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g2876 Pvu-Chr3 50524993 50531458 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g2876 1 344 Major Intrinsic Protein MIP AT1G31880 69.492 3.05e-169 473
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g2876 - - gmx:100785003 676.781
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g1188 2 23365486 23367256 Pvu3g2876 3 50524993 50531458 PCT