Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g2873 ATGATCACTGATGTGCCCCCATCTATGATGCAAAGCAGTAGGTCAAGCAGATATTCCTTTGGCTCTAGCAATGGCAATGATGATACCCCAGCACACAACGGTGCTGCTGTTGTCAATGTTGATGACTATGATAGTGATAGTTCCAATTTTGCCCCACCCACGCCATCAACTATGTCAATGAATGTTCCAGCAGAACTCGCTGGAGCTGTACCCCTGATCAACAGATTCCAGGTGGATGGATTTTTAAAATTGATGCAGAAGCAAATTCAATCTGGTGGGAAACGTGGATTTTTTTCTAAAAGGTCTGTAGGTCCTCAAGTTCGAGAAAAAATTACATTTGAGGACATGTTGAGTTTTCAAAAGGATCCAATTCCAACATCATTGCTCAAGTTAAATGTTGATTTAGTAAGCCGGGCTACAAAATTATTCCAAATAATTTTGAAATATATGGGAATTGATCCATCTGATCGAGTAACTCCTATAAGCTTAGATGAACGGGTTGAGCTTGTAGGGAAGCTGTACAAGCAAAATTTGAAACGACCAGAACTACGAGATGAACTTTTTGTTCAGATATCAAAGCAAACAAGAAATAACCCGGAGAGGCAATACTTGATTAAAGCATGGGAGCTCATGTATTTATGTGCATCTTCAATGTCTCCTAGTAAAGACATTAGCAGTTACCTATCAGAATACATTCATAACATAGCAACTGGTGTGGGTACTGATTCTGAGATCCAAATACTTGCATTAAATTCATTAAATGCTTTGAAGCATTCTGTCAAGGCTGGTCCCAGACATATAATTCCTGGACGTGAGGAGATTGAAGCTCTATTGACCGGGAGAAAGCTTACAACAATAGTGTTTTTCCTGGATGAAACATTTGAAGAAATTGCATATGACATGTCAACCACAGTTTCTGATGCTGTTCAGGAACTTGCAGGGCTCATTAAACTGTCCGCATACTCCAGCTTTAGTCTATTTGAATGTCGTAAAGTTGTTACTGGCTCCAAAGCACCTGATCTTGGGAATGAGGAGTACATTGGGTTAGATGAAAACAAATATATTGGGGATCTGCTGGCAGAATTCAAAGTTGCAAAGGATCGAAGTAAAGGAGAAATCTTGCACTGTAAATTGATATTCAAGAAAAAGTTATTTCGTGAGTCAGATGAAGCTGTGACAGAACCAATGTTTGTGCAATTGTCTTACGTACAATTGCAACATGATTATATTTTGGGCAATTATCCTATTGGAAGGGATGATGCAGCTCAGCTTTCTGCTCTACAAATCTTGGCTGAGATTGGTTTTCTTAGCACACCAGAATCATGCACTGACTGGAATTCACTGCTGGAGCGTTTTCTGCCAAGACAAATTTCAATGACACGAGCAAAACGGGAATGGGAGTATGACATTATTTCTCGTTATCGATCATTGGAGAATCTGACAAAAGATGATGCACGGCAACAATTTCTACGTATATTGAGAGCACTGCCTTATGGAAATTCTGTTTTCTTCAATGTCCGCAAGATTGATGATCCTATTGGACTCTTACCTGGTCGGATAATTTTGGGAATTAATAAAAGAGGGATTCATTTTTTCCGACCAGTTCCTAAGGAATATTTGCACTCTGCTGAGTTGAGAGACATAATGCAATTTGGAAGCAGCAATACTGCAGTCTTTTTTAAAATGAGAGTTGCAGGAGTTCTTCACATATTCCAGTTTGAAACCAAGCAGGGAGAGGAAATTTGTGTAGCTCTTCAGACTCATATAAATGATGTAATGCTGCGCCGCTACTCGAAAGCACGATCTGGTGGTGGTGGTGGTGCTGGTTCTTTGAATGGAGATATTTCTAACAATTCTTCTAAACCTCCTAATATGGAGTTATATGAGAAGCGTGTTCAAGACTTGTCAAAACTAATTGAAGAATCTCAAAAAAATGCTGATCAATTGCTTGAAGAATTACGTGTGAAGCAAAGACAAGAAGAGAAAATGCAAGAAGAATTGGATGGCTTGAAAGAATCCTTAAAAGCTGATAAGAAAAATCTAGATTCTGTTACAAGTGACCGTGATAGACTTAGATCATTATGCAATGAAAAAGATAAGGAACTACAGGCTGCTATTCTAGACAAAAGGAATATGGAATCCAGGATGGCCAAGTTAAGTAATGCGGTGATAGAGAACACTGCCAAAAAGGATCTTGCTAATGCTGGAAATAGACAGGTGACTCAAAAGCTTGAAGATGAGCTAAAAATTTGTAAATATGAGCTGTTTGCAGCCAATGAAATTGTCAAAAGCTTGAAAAGTGAAAAAATGATTTTGGAACAGAATTTATCTGCACTTGAGAAGAGGAATGCTGGAGAGATTAGTTCCCTTCAATGGAAACTTGAGCAAGAACGCAAAGCTGTTAAGTCTGAAGCATACGAGCTTGAAAGAAGGCTAGAAGGGTGTAGACAAGAATTATTGGCTGCTAAGGCTACTATTTCAGTCAAGGACTCTGAGTTGGTTTCAATGCAAAATAATTTGAAGGAACTAGAAGAATTGAGAGAAATGAAAGAGGATATTGATAGAAAGAATGAACAGACAGCTGCCATACTGAAAATGCAAGGAGCTCAACTAGCTGAAATGGAAACACTTTATAAGGAAGAACAGGTTTTAAGGAAGCGCTATTTTAATGTAATAGAAGACATGAAAGGCAAGATTAGAGTTTACTGTCGACTAAGGCCTCTCAATGAAAAAGAGATGGCTGAGAAAGAAAGAGAAGTTCTCACTGCAGTTGATGAGTTTACAGTTGAATATCCATGGAAAGATGATAAGCCAAAGCAGTACATATATGACCGTGTTTTTGATGCTGGTGCAACTCAAGAAAGTGTATTTGAGGATACAAAGTATTTGGTGCAGTCTGCTGTAGATGGTTACAATGTTTGCATATTTGCTTATGGTCAAACTGGCTCTGGAAAGACATTTACAATCTATGGATCAGACAACAACCCTGGACTTACCCCTCGTGCAATTTCAGAACTTTTTAGAATTTTAAGAAGAGATAATAACAAGTACTCTTTTTCCTTGAAGGCATACATAGTGGAATTGTATCAAGATACCCTCATAGATCTTTTGGCACCAAAGAATGGAAAACATTCAAAATTGGATATCAAGAAGGATTCAACGGGAATGGTAGTTGTGGAAAATGTGACAGTTATGTCAATTTCTACAATTGAAGAATTGAATAACATAATACAAAGAGGATCTGAACGGCGACATATATCAGGAACCCAAATGAATGATGAAAGTTCAAGATCTCATCTCATTCTATCAATTGTAATTGAAAGTACCAACCTTCAAAGTCAGTCAGTTGCAAGGGGAAAGCTGAGTTTTGTGGATCTTGCTGGTTCAGAAAGAGTGAAAAAGTCAGGTTCTACTGGGAGTCAGCTTAAGGAAGCTCAAAGCATTAACAAGTCATTATCAGCCCTTGCAGATGTTATCAGTGCTTTGTCTTCTGGTGGTCAACACACACCATACAGGAATCACAAGTTAACCATGTTGATGAGTGATTCACTTGGTGGTAATGCCAAAACTCTAATGTTTGTGAATGTTTCTCCAGCAGAATCAAATTTGGATGAGACACATAACTCTCTCATGTACGCATCCCGAGTAAGATCCATTGTGAATGACCCCAGCAAGAATGTTTCTTCAAAGGAGATAGCAAGGCTGAAGAAGCTGGTTGCATATTGGAAACAGCAAGCTGGTAGAGGACATGAGTATGAAGACTTAGAAGAAATTCAAGATGAAAGACCAACTAAAGAGAATGGTAATGGCAATAGGTAA 3819 0.3849 MITDVPPSMMQSSRSSRYSFGSSNGNDDTPAHNGAAVVNVDDYDSDSSNFAPPTPSTMSMNVPAELAGAVPLINRFQVDGFLKLMQKQIQSGGKRGFFSKRSVGPQVREKITFEDMLSFQKDPIPTSLLKLNVDLVSRATKLFQIILKYMGIDPSDRVTPISLDERVELVGKLYKQNLKRPELRDELFVQISKQTRNNPERQYLIKAWELMYLCASSMSPSKDISSYLSEYIHNIATGVGTDSEIQILALNSLNALKHSVKAGPRHIIPGREEIEALLTGRKLTTIVFFLDETFEEIAYDMSTTVSDAVQELAGLIKLSAYSSFSLFECRKVVTGSKAPDLGNEEYIGLDENKYIGDLLAEFKVAKDRSKGEILHCKLIFKKKLFRESDEAVTEPMFVQLSYVQLQHDYILGNYPIGRDDAAQLSALQILAEIGFLSTPESCTDWNSLLERFLPRQISMTRAKREWEYDIISRYRSLENLTKDDARQQFLRILRALPYGNSVFFNVRKIDDPIGLLPGRIILGINKRGIHFFRPVPKEYLHSAELRDIMQFGSSNTAVFFKMRVAGVLHIFQFETKQGEEICVALQTHINDVMLRRYSKARSGGGGGAGSLNGDISNNSSKPPNMELYEKRVQDLSKLIEESQKNADQLLEELRVKQRQEEKMQEELDGLKESLKADKKNLDSVTSDRDRLRSLCNEKDKELQAAILDKRNMESRMAKLSNAVIENTAKKDLANAGNRQVTQKLEDELKICKYELFAANEIVKSLKSEKMILEQNLSALEKRNAGEISSLQWKLEQERKAVKSEAYELERRLEGCRQELLAAKATISVKDSELVSMQNNLKELEELREMKEDIDRKNEQTAAILKMQGAQLAEMETLYKEEQVLRKRYFNVIEDMKGKIRVYCRLRPLNEKEMAEKEREVLTAVDEFTVEYPWKDDKPKQYIYDRVFDAGATQESVFEDTKYLVQSAVDGYNVCIFAYGQTGSGKTFTIYGSDNNPGLTPRAISELFRILRRDNNKYSFSLKAYIVELYQDTLIDLLAPKNGKHSKLDIKKDSTGMVVVENVTVMSISTIEELNNIIQRGSERRHISGTQMNDESSRSHLILSIVIESTNLQSQSVARGKLSFVDLAGSERVKKSGSTGSQLKEAQSINKSLSALADVISALSSGGQHTPYRNHKLTMLMSDSLGGNAKTLMFVNVSPAESNLDETHNSLMYASRVRSIVNDPSKNVSSKEIARLKKLVAYWKQQAGRGHEYEDLEEIQDERPTKENGNGNR* 1273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g2873 1272 Coils Coil 625 680 - -
Pvu3g2873 1272 MobiDBLite consensus disorder prediction 602 624 - -
Pvu3g2873 1272 Pfam Kinesin motor domain 904 1219 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pvu3g2873 1272 SUPERFAMILY Prismane protein-like 841 902 IPR011254 GO:0003824|GO:0016491
Pvu3g2873 1272 PRINTS Kinesin heavy chain signature 970 991 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pvu3g2873 1272 PRINTS Kinesin heavy chain signature 1089 1106 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pvu3g2873 1272 PRINTS Kinesin heavy chain signature 1120 1138 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pvu3g2873 1272 PRINTS Kinesin heavy chain signature 1169 1190 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pvu3g2873 1272 PANTHER KINESIN-LIKE CALMODULIN-BINDING PROTEIN 619 1272 - -
Pvu3g2873 1272 SMART MyTH4_1 119 278 IPR000857 GO:0005856
Pvu3g2873 1272 Gene3D - 1222 1269 - -
Pvu3g2873 1272 Gene3D - 282 386 - -
Pvu3g2873 1272 CDD KISc_C_terminal 896 1221 - -
Pvu3g2873 1272 Coils Coil 762 782 - -
Pvu3g2873 1272 CDD FERM_C_KCBP 500 602 - -
Pvu3g2873 1272 SUPERFAMILY PH domain-like 503 591 - -
Pvu3g2873 1272 Gene3D Kinesin motor domain 885 1221 IPR036961 -
Pvu3g2873 1272 CDD FERM_B-lobe 398 496 IPR019748 -
Pvu3g2873 1272 MobiDBLite consensus disorder prediction 1 30 - -
Pvu3g2873 1272 Gene3D - 395 496 IPR014352 -
Pvu3g2873 1272 SMART B41_5 279 503 IPR019749 -
Pvu3g2873 1272 ProSiteProfiles FERM domain profile. 283 597 IPR000299 GO:0005856
Pvu3g2873 1272 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 898 1248 IPR027417 -
Pvu3g2873 1272 SUPERFAMILY Second domain of FERM 381 498 IPR035963 -
Pvu3g2873 1272 MobiDBLite consensus disorder prediction 1246 1272 - -
Pvu3g2873 1272 MobiDBLite consensus disorder prediction 1247 1272 - -
Pvu3g2873 1272 PANTHER KINESIN-RELATED 619 1272 IPR027640 GO:0003777|GO:0007018
Pvu3g2873 1272 ProSitePatterns Kinesin motor domain signature. 1119 1130 IPR019821 GO:0003777|GO:0005524|GO:0007018
Pvu3g2873 1272 Pfam MyTH4 domain 172 276 IPR000857 GO:0005856
Pvu3g2873 1272 Coils Coil 826 863 - -
Pvu3g2873 1272 ProSiteProfiles MyTH4 domain profile. 119 278 IPR000857 GO:0005856
Pvu3g2873 1272 Gene3D - 501 607 IPR011993 -
Pvu3g2873 1272 Coils Coil 798 818 - -
Pvu3g2873 1272 SMART kinesin_4 896 1227 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pvu3g2873 1272 Pfam FERM central domain 389 503 IPR019748 -
Pvu3g2873 1272 Coils Coil 702 722 - -
Pvu3g2873 1272 Gene3D MyTH4 domain 98 280 IPR038185 -
Pvu3g2873 1272 MobiDBLite consensus disorder prediction 1 34 - -
Pvu3g2873 1272 ProSiteProfiles Kinesin motor domain profile. 898 1219 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g2873 Pvu-Chr3 50484187 50493436 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g2873 51 1269 Calmodulin-binding Proteins AT5G65930 73.546 0.0 1820
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g2873 - - gmx:100807481 2299.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g1241 2 24349281 24358869 Pvu3g2873 3 50484187 50493436 PCT