Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g2870 ATGCGATATTTGTGCTTCAACGGAGTTTCAAACCAGAATTTTGTAGTGATGGGAACAGTTTCAGGGAGGGAGATATGGAAAGCACACACGTCGTTGGTGATGGTGCAGCTGTTTAGCGGTGGCTATCACGTTATCTCGAAATCGGTTCTTGACGATGGCATCAACCAAATCGTCTACTGCGTCTTCCGCGATCTCATTGCCTTCCTCATTCTCGCTCCCGTCGCTTATATCCGTGAAAGGCGTACACGGCCACCGATAACTAAACGCCTTCTACTGTCATTCTTCTTTCTTGGATTGACTGGGATATTTGGCAACCATCTTTTGTTTCTTATTGGCTTAAGCTATACTAGTCCAACTTATGCTGCTGCGGTTCAGCCAGCCACTCCGGTCTTTACTTTTCTATTGGCTGTGATGATGGGTACAGAAAGAGTGAACTTGCTAAGATATGAAGGTTTGGCCAAGGTTGGAGGAACTTTCTCCTGTGTTTCAGGTGCTGTACTGATGGTTTTGTACCGTGGTCCGCCATTGATAGGATATTCAGAAACAGACTTTGTATCACACAGTGAAATAAGTGCCAAAGGTCAACCAGAGCCTTCTGGATGGTTAATTGGTGGCTTACTGGATCTTGGATTTGATCAATTTCATCTGGGAGTTTTGTGCTTCATAGGGAATTGCATGTGCATGGCTGCTTTTCTAACCATTCAGGCTCCACTGTTAAAAAAGTATCCGGCAAACCTATCTGTCACGGCATATTCATACTTCTTTGGAGCTGTTCTGATGGTAACTACATCTTTCTTTGCAACTAACGAGTCAACTGACTGGAGATTGACACAGTCCGAAACAATTGCTGTTATTTATGCTGGATTTATCGCATCTGCCCTTAATTATGGACTGATTACATGGTGCAACAAGATCTTGGGGCCAGCCATGGTTGCTCTTTATAACCCACTTCAACCAGGAGCTTCTGCTCTCCTATCTAGAATTTTTCTTGGAACTCCAATTTACATGGGAAGCATTTTAGGGGGTTCTTTGATCATTATTGGTTTGTATGCGGTTACTTGGGCGTCTTATAGAGAAAGACACGCAGCTGCTGCAGTTATTTCTCATGGCTCTCGGGTCTCTGAATCACTTATCCATGACAAGACTTCTTATAGAGTTAACATTTTTTCAGGCCCCCCCACCATGTCCCCAAAGCCTTCAGATTAA 1206 0.4395 MRYLCFNGVSNQNFVVMGTVSGREIWKAHTSLVMVQLFSGGYHVISKSVLDDGINQIVYCVFRDLIAFLILAPVAYIRERRTRPPITKRLLLSFFFLGLTGIFGNHLLFLIGLSYTSPTYAAAVQPATPVFTFLLAVMMGTERVNLLRYEGLAKVGGTFSCVSGAVLMVLYRGPPLIGYSETDFVSHSEISAKGQPEPSGWLIGGLLDLGFDQFHLGVLCFIGNCMCMAAFLTIQAPLLKKYPANLSVTAYSYFFGAVLMVTTSFFATNESTDWRLTQSETIAVIYAGFIASALNYGLITWCNKILGPAMVALYNPLQPGASALLSRIFLGTPIYMGSILGGSLIIIGLYAVTWASYRERHAAAAVISHGSRVSESLIHDKTSYRVNIFSGPPTMSPKPSD* 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g2870 401 Pfam EamA-like transporter family 32 152 IPR000620 GO:0016020|GO:0016021
Pvu3g2870 401 Pfam EamA-like transporter family 216 353 IPR000620 GO:0016020|GO:0016021
Pvu3g2870 401 SUPERFAMILY Multidrug resistance efflux transporter EmrE 63 153 - -
Pvu3g2870 401 PANTHER WAT1-RELATED PROTEIN 26 387 - -
Pvu3g2870 401 SUPERFAMILY Multidrug resistance efflux transporter EmrE 272 359 - -
Pvu3g2870 401 PANTHER WAT1-RELATED PROTEIN 26 387 IPR030184 GO:0016021|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g2870 Pvu-Chr3 50446885 50456149 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g2870 111 382 Nodulin-like Gene Family AT5G45370 63.899 6.26e-124 358
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g2870 - - gmx:100809051 684.485
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g2870 3 50446885 50456149 Pvu3g2870 3 50446885 50456149 ECH
Pvu2g1248 2 24452760 24460093 Pvu3g2870 3 50446885 50456149 PCT