Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g2869 ATGACAGAAAACTGCATAGCATTCAAACCAGATCACAGCAACAGTCACCCTCAGGAAGGACCCCCCAAGATGACTGAGACTGTCCTACAAACAAACGAGCAATCTTTTCTAAAACTCGCTGTGTACCCCATAACTTTGAAGTTTGAGGAATTGGTGTACAAAGTTAAAGTGGAGCAGAAGGGTATGTGTTGGGGGAGCACAGGGAGTTCTAGAGAGAAGACCATACTGAAAGGAGTCACGGGTATGGTTTGTCCAGGAGAAATAATGGCTATGTTGGGGCCTTCTGGCAGTGGCAAAACCACACTTCTCACAGCCCTTGGAGGAAGGCTTAGTGGCAAATTATCTGGAAAGGTAACATATAACAACCAGCCTTTTTCAGGAGCCATGAAAAGAAGAACAGGTTTTGTGGCTCAGGATGATGTGTTATACCCCCATCTCACTGTGACTGAAACTCTGCTCTTCACTGCACTTCTGAGGCTCCCCAGCAGCTTGACCAAGGAAGAAAAAGCTCAACATGTAGAGCATGTTATCAGTGAGCTAGGACTGAGCAAGTGCAGGGGTAGCATGATTGGAGGCCCCCTATTCAGAGGGATATCAGGTGGGGAGAGAAAAAGGGTGAGCATAGGCCAGGAAATGCTCATCAATCCAAGCCTGTTGCTGCTGGATGAACCCACTTCTGGCTTGGACTCTACAACAGCACAAAGGATCATGACCACAATCAAACGCTTGGCTAGTGGGGGAAGAACTGTTGTCACCACCATTCATCAACCCTCTAGTCGCCTCTATCACATGTTTGATAAAGTGGTCTTGCTTTCTGAAGGATGCCCCATCTACTATGGCCCCGCTTCAACTGCAATGGCCTACTTTTCTTCTGTTGGTTTTTCCACATCCATGATTGTCAATCCTGCTGATTTGTTGCTTGATCTTGCCAATGGAATTGCTCCGGACTCCTCCAAGCATGGAACTGAACAAAGAGAAAGCCAGGAGGCAGAAAATAAGTTGGTTAGAGAAGCCTTAATCTCTGCTTATGACAAAAATATAGGTACTAAGCTGAAAGATGAATTATGCAGCTTGGAAGTGAATAACTATGAAGTCATTAAGGATGGTTCCACAAGAAATCAAATAAAACCTGAGCGATGGTGCACAAGTTGGTGGCATCAGTTCAAAGTGCTGTTGCAAAGGGGGCTGAGGGAGAGAAGGTTTGAAGCCTTCAACAGGCTGAGAATTTTCCAAGTCATAAGTGTCGCTTTCCTTGGAGGACTTCTGTGGTGGCACACCCCAGAATCGCACATTGGAGACAGGATAGCCCTGCTGTTTTTCTTCTCTGTCTTCTGGGGATTCTACCCTCTCTACAATGCTGTTTTCACATTTCCACAAGAGAGAAGAATGTTGATCAAGGAACGTTCATCTGGGATGTACCGTCTATCTTCCTACTTTCTAGCTAGAACAGTAGGAGACTTGCCAATAGAGCTTGCACTTCCAACTGCATTTGTGTTCATAATCTATTGGATGGGAGGGCTTAATCCTCATCCACTCACCTTTTTCCTTTCCCTCCTAGTGGTCCTTTACAGTGTCCTTGTCTCTCAAAGCCTTGGCTTAGCATTTGGGGCCATTTTGATGGAGGTCAAACAGGCCACTACCTTAGCTTCTGTGACAACCCTTGTGTTCCTCATTGCTGGTGGCTACTATATTCAACAGATTCCTCCCTTCATAGAGTGGCTCAAGTACTTAAGCTATAGCTACTACTGTTACAAGCTTCTTGTTGGTGTGCAGTACATGGATGATGATTATTATGAGTGCTCAAAGGGGGTCTTGTGCAAGGTTGGAGAATTTCCTCCAATCAAATCAGTGGGTTTGAACCACTTGTGGGTTGACATGTCTATAATGGCCATGATGTTGGTAGGTTACCGTCTAGTTGCTTATTTAGCACTGCAGAGAGTGAGGTAG 1947 0.4551 MTENCIAFKPDHSNSHPQEGPPKMTETVLQTNEQSFLKLAVYPITLKFEELVYKVKVEQKGMCWGSTGSSREKTILKGVTGMVCPGEIMAMLGPSGSGKTTLLTALGGRLSGKLSGKVTYNNQPFSGAMKRRTGFVAQDDVLYPHLTVTETLLFTALLRLPSSLTKEEKAQHVEHVISELGLSKCRGSMIGGPLFRGISGGERKRVSIGQEMLINPSLLLLDEPTSGLDSTTAQRIMTTIKRLASGGRTVVTTIHQPSSRLYHMFDKVVLLSEGCPIYYGPASTAMAYFSSVGFSTSMIVNPADLLLDLANGIAPDSSKHGTEQRESQEAENKLVREALISAYDKNIGTKLKDELCSLEVNNYEVIKDGSTRNQIKPERWCTSWWHQFKVLLQRGLRERRFEAFNRLRIFQVISVAFLGGLLWWHTPESHIGDRIALLFFFSVFWGFYPLYNAVFTFPQERRMLIKERSSGMYRLSSYFLARTVGDLPIELALPTAFVFIIYWMGGLNPHPLTFFLSLLVVLYSVLVSQSLGLAFGAILMEVKQATTLASVTTLVFLIAGGYYIQQIPPFIEWLKYLSYSYYCYKLLVGVQYMDDDYYECSKGVLCKVGEFPPIKSVGLNHLWVDMSIMAMMLVGYRLVAYLALQRVR* 649
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g2869 648 MobiDBLite consensus disorder prediction 1 24 - -
Pvu3g2869 648 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 29 646 - -
Pvu3g2869 648 Pfam ABC-2 type transporter 387 592 IPR013525 GO:0016020|GO:0140359
Pvu3g2869 648 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 46 298 IPR003439 GO:0005524
Pvu3g2869 648 Pfam ABC-2 type transporter 255 323 IPR043926 GO:0140359
Pvu3g2869 648 ProSitePatterns ABC transporters family signature. 198 212 IPR017871 GO:0005524
Pvu3g2869 648 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 71 291 IPR027417 -
Pvu3g2869 648 Pfam ABC transporter 76 226 IPR003439 GO:0005524
Pvu3g2869 648 SMART AAA_5 85 275 IPR003593 -
Pvu3g2869 648 CDD ABCG_EPDR 43 280 - -
Pvu3g2869 648 Gene3D - 65 292 IPR027417 -
Pvu3g2869 648 PANTHER ABC TRANSPORTER, G1, P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASE-RELATED 29 646 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g2869 Pvu-Chr3 50429905 50433359 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g2869 75 274 Calmodulin-binding Proteins AT2G36910 30.435 8.65e-13 70.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g2869 K05681 - gmx:100776279 1159.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g1251 2 24571337 24574591 Pvu3g2869 3 50429905 50433359 PCT