Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g2856 ATGGAGAGTGTAAGAATCATCCAATGGTTAAATCTTGTAGCCTGTGTACTGCTATTGCTTAAGGCAGAAGGGTCTTTGGTTCCATTGACTTTGGTCGAGAATGCACTGTCGAAAGGAGCTGTTTGTTTGGATGGAAGTCCCCCAGCTTACCACTTTGATAAGGGAGATGGAGAAGGGATTAACAACTGGATTGTTCACATGGAGGGAGGAGGATGGTGCAAAGATGCCGACGATTGCCTTGGGCGTAAGGACACTCGTTTAGGCTCATCCAAGCAAATGGTTGAGGATCTTTACTTTTCTGGAATTCTAAGCAACGAGCGAGAGTATAATCCAGATTTCTACAATTGGGATAGAGTGAAGATTAGGTACTGTGATGGGTCATCGTTTACTGGTGATGTGGAAGAAGTTGATCCAACAAACAATTTGTACTTTAGAGGAGCAAGGATTTTTTCAGCTGTAATGGAAGATTTATTAGCAAAAGGCATGGAGAAGGCTGAAAATGCTATTCTCTCGGGCTGTTCAGCTGGAGGATTGACTACTATATTACACTGTGACAATTTTAAAGCTCTGTTGCCTTCTAAAGCTACTGTAAAATGTGTTCCAGATGCTGGTTATTTTATCAATGTAGAGGATATCTCAGGAGCACGTTTCATTGAAGATTATTACAGTAAAGTTGTGTCAACACATGGCTCAGCAAAGAATTTGCCCACATCTTGCACTTCCAAACTCAGCTCAGGACTGTGCTTTTTCCCACAATATGTGGCATCACATATCAGTACCCCAATCTTCATAGTAAATTCAGCCTATGACTCATGGCAGATTCGGAACATCTTGGCACCTGGTGCTGCTGATCCCAGTGACAATTGGCATAGCTGCAAGCTTGATTTAGCCAAATGCTCACCTGATCAACTGAGTATAGTGCAAGGGTTCAAGAAGGAATTCGAGAAGGCGGTGAGTGTGGTTGGAGACTCTTCATCCAACGGAATGTTCATAAACTCTTGCTATGACCACTGCCAAACAGAATCACAGGAGACATGGTCTAAAAGTGACTCACCTCATCTTGCCAATACAACAATTTCCAAGGCAGTAGGGAACTGGTTTTATGATCGAAGTCCTTTCCATCATGTAGATTGCAACTATCCTTGCAACCCCACTTGCCAGAACACTGTTTCTGATCTAAAAGATCACCCTGGAATCTAG 1200 0.4283 MESVRIIQWLNLVACVLLLLKAEGSLVPLTLVENALSKGAVCLDGSPPAYHFDKGDGEGINNWIVHMEGGGWCKDADDCLGRKDTRLGSSKQMVEDLYFSGILSNEREYNPDFYNWDRVKIRYCDGSSFTGDVEEVDPTNNLYFRGARIFSAVMEDLLAKGMEKAENAILSGCSAGGLTTILHCDNFKALLPSKATVKCVPDAGYFINVEDISGARFIEDYYSKVVSTHGSAKNLPTSCTSKLSSGLCFFPQYVASHISTPIFIVNSAYDSWQIRNILAPGAADPSDNWHSCKLDLAKCSPDQLSIVQGFKKEFEKAVSVVGDSSSNGMFINSCYDHCQTESQETWSKSDSPHLANTTISKAVGNWFYDRSPFHHVDCNYPCNPTCQNTVSDLKDHPGI* 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g2856 399 Pfam Pectinacetylesterase 21 372 IPR004963 GO:0016787
Pvu3g2856 399 PANTHER NOTUM-RELATED 3 393 IPR004963 GO:0016787
Pvu3g2856 399 PANTHER PECTIN ACETYLESTERASE 3 393 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g2856 Pvu-Chr3 50294983 50299396 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g2856 5 399 Carbohydrate Esterase AT4G19420 55.581 0.0 525
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g2856 K19882 - gmx:100780707 690.649
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g2856 3 50294983 50299396 Pvu3g2856 3 50294983 50299396 ECH
Pvu2g1278 2 24997760 25002036 Pvu3g2856 3 50294983 50299396 PCT