Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g2855 ATGGAAATGCTAGTTTGTGGATTTTCCATTGTAGTTACTTATTGGGGTATTAGAGTGAGAATGGTGAGCAGAGGCCAATGGTTAAGTGTGTTAATATGTGTGGTACTATTACTAAAAGCAGAAGGGGTTCCCGTGGGAATCACTTTTGTTGAAAATGCTGTGGCAAAAGGAGCTGTTTGTTTGGATGGGAGTGCACCGGCTTACCACTTTCATAAGGGATCTGGAGCAGGGATTAACAACTGGATAGTTCACTTTGAGGGAGGAGGATGGTGCAACAACGTTACTTCTTGCCTTTCCCGTAGGGACACTCGATTAGGTTCATCTAAGAAAATGGATACCCAACTTTCCTTTTCTGGATTTTTTAGTAACAGTAAAAAGTTCAATCAAGATTTCTATGATTGGAACAGGATCAAGGTTAGGTATTGTGATGGGTCATCATTTACTGGTGATGTTGAAGCTGTTGATCCAAGAACCAATTTGCACTTCAGAGGGGCAAGGGTTTTTGCTGCTGTTGTTGAAGATTTACTAGCAAAAGGAATGAAAAATGCTCAAAATGCAATTATCTCTGGATGTTCTGCTGGAGGATTGGCTGCAATTTTAAACTGTGATCGATTCAAAGCACTGCTTCCTAGAACAACTAAAGTGAAATGCCTTGCAGATGCTGGTTATTTCATCAATGTAAAGGATGTCTCAGGGGCACAGCGCATTGAAGAATTCTACAGTCAAGTTGTTCAAACACATGGCTCAGCTAAGAATTTGCCTTCATCCTGCACTTCAAGACTCAAACCAGGGCTGTGTTTTTTCCCTCAAAATGTTGTATCACAAATCAGTACTCCAATCTTCTTCGTAAATGCAGCCTATGATTCATGGCAGATCAAAAACATTTTGGCACCAGGTGCTGCTGATCCCCATGGCCAATGGCGTGAATGCAAGCTTGATATCAAAAACTGCTCACCAAATCAACTCAGTGTAATGCAAGTATTCAGGACTGATTTCCTAAGGGCATTTGGTGCTGTGGGGAACTCTCCATCTAAAGGGCATTTTATAGATGGTTGCTATGCTCACTGCCAAACTGGAACACAAGAGACATGGTTGAGAAATGACTCTCCTGTGTTAGGCAACACAACAATTGCAAGGGCAGTGGGAGACTGGTTTTATGATCGAAGGGCATTCCATCAGATAGATTGTGCCTACCCTTGCAACCCCACTTGCCACAATCGTATTTTTGATCAGAATGCTCTTCCAGACGTATAG 1254 0.4211 MEMLVCGFSIVVTYWGIRVRMVSRGQWLSVLICVVLLLKAEGVPVGITFVENAVAKGAVCLDGSAPAYHFHKGSGAGINNWIVHFEGGGWCNNVTSCLSRRDTRLGSSKKMDTQLSFSGFFSNSKKFNQDFYDWNRIKVRYCDGSSFTGDVEAVDPRTNLHFRGARVFAAVVEDLLAKGMKNAQNAIISGCSAGGLAAILNCDRFKALLPRTTKVKCLADAGYFINVKDVSGAQRIEEFYSQVVQTHGSAKNLPSSCTSRLKPGLCFFPQNVVSQISTPIFFVNAAYDSWQIKNILAPGAADPHGQWRECKLDIKNCSPNQLSVMQVFRTDFLRAFGAVGNSPSKGHFIDGCYAHCQTGTQETWLRNDSPVLGNTTIARAVGDWFYDRRAFHQIDCAYPCNPTCHNRIFDQNALPDV* 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g2855 417 Pfam Pectinacetylesterase 39 389 IPR004963 GO:0016787
Pvu3g2855 417 PANTHER PECTIN ACETYLESTERASE 24 412 - -
Pvu3g2855 417 PANTHER NOTUM-RELATED 24 412 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g2855 Pvu-Chr3 50280819 50285824 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g2855 21 417 Carbohydrate Esterase AT4G19420 59.491 0.0 551
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g2855 K19882 - gmx:100781246 759.214
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g2855 3 50280819 50285824 Pvu2g1278 2 24997760 25002036 PCT