Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g2853 ATGAGGCCACGCAGGGACAGTGAGAGGCGCAGATTCGCTTCGGAATCGCGAGACTCACCAGCAGGCTCAGAATCGCCGCGTCGTAGGCCGCGGCTGTTCGCTCTCATGGCGGGGCAATCGCGGAAATGGATGATCCTAGTTGCCACGATTTGGATTCAGGCCTTCACCGGCACCAATTTCAATTTCTCACAGTACTCGTCATCACTCAAATCCGCGCTCAACGTCTCGCAGGTGCAATTGAACTACCTCGCCACCGCCAACGACATGGGGAAGGTTTTCGGCTGGTCCTCCGGCATCGCGCTCATGCACCTTCCCCTATCGCTCGTCCTGTTCATCGCCGCTTCCATGGGATTCTTCGGCTACGGCCTCCAGTGGCTCCTCCTCACCGGAGTCCTCGATTTGCCTTATTTTCTGGTCTTTCTTTTGTGCCTTTTAGGTGGCTGTAGCATCTGTTGGTTCAACACAGTATGTTTTGTTCTCTGCATTAGGAATTTCCCAGTTAACCGAGCCCTTGCCCTATCGCTCACTGTGAGTTTCAATGGCGTTAGTGCAGCACTCTACACCCTTGCTGCCAATTCTATTGACCCTTCCTCCAATGCAATTTATCTGCTTTTGAATGCTGTCGTTCCCCTTCTTGTATGCATTGCAGCACTTGTTCCTATTCTTCGGCAACCGACTTTAGACCCTCTCCCTCCTGATGCTGTAAACCGGGACTCAGTTATATTTCTAATATTGAACTTCCTGGCCCTTTTAACTGGTCTTTATCTTCTCCTGTTTGGCTCTTCCAGTTCTGGTGTGACTTCTGCCCGGCTTTGTTTTGGTGGAGCTATTATCCTCCTCATATTCCCATTATGTATTCCTGGCATTATATATGCTCGGGCTTGGTTTCGGCAGACCATCCATTCCAGCTTTCGGATGGAAAGTTCCAGCTTCATTCTTGTTCATGATGATGATCTCGAGATGCATAAAGAACTCCATAGCCGCCATAGTGGTATTTTTGGCAATGGAGACACTTACGACCTGCTAAGTGACAATGGATACATGTACGGCAGTCAGAACGCAAAAGAGAGTGATGTAGGTTGCGAGAGGGTAATTGGCCAGGATCAGTTGGCAGTGCTAGGAGAAGAGCACCCAGTTGCAGTAGTTGTTCGCAGATTGGATTTTTGGCTATACTATCTTACATACTTCTGTGGAGGTACACTTGGTCTAGTCTATAGCAATAATCTTGGACAGATTGCCCAGTCTCTGGGCCAGAGCTCAAATACTTCTACGCTTGTTACGCTCTATGCATCCTTTTCCTTTTTTGGTCGCCTGCTTTCAGCTGGACCAGACTATATTCGGAATAAGCTCTACTTTGCAAGGACTGGTTGGCTTTCAATTGCACTTATACCAACCCCAGTTGCGTTCTTCCTCCTTGCTGCATCAGACAGTCTTCTGGCACTGCAGACAGGCACCGCACTGATTGGATTGAGCTCTGGTTTTATATTCGCAGCTGCTGTGTCAGTTACATCTGAGCTGTTTGGACCTAATAGTGTGGGTGTCAATCACAACATCCTCATAACAAATATACCTATTGGTTCTCTTCTCTATGGCTTTCTCGCTGCACTGGTTTATGATGCTAGTTCTCACTCAACACCAGGAAACTTGTTAGTGTCTGACTCGGTAGTGTGCATGGGAAGGGAGTGTTACTTCTGGACATTTGTCTGGTGGGGATGCATATCTGTCCTTGGACTAGCATCAAGCATCCTATTATTCTTAAGAACCAAGCATGCATATGATCATTTTGAGAAACACCGTATGTCAACACAATCAATTGTGTCTTAA 1824 0.477 MRPRRDSERRRFASESRDSPAGSESPRRRPRLFALMAGQSRKWMILVATIWIQAFTGTNFNFSQYSSSLKSALNVSQVQLNYLATANDMGKVFGWSSGIALMHLPLSLVLFIAASMGFFGYGLQWLLLTGVLDLPYFLVFLLCLLGGCSICWFNTVCFVLCIRNFPVNRALALSLTVSFNGVSAALYTLAANSIDPSSNAIYLLLNAVVPLLVCIAALVPILRQPTLDPLPPDAVNRDSVIFLILNFLALLTGLYLLLFGSSSSGVTSARLCFGGAIILLIFPLCIPGIIYARAWFRQTIHSSFRMESSSFILVHDDDLEMHKELHSRHSGIFGNGDTYDLLSDNGYMYGSQNAKESDVGCERVIGQDQLAVLGEEHPVAVVVRRLDFWLYYLTYFCGGTLGLVYSNNLGQIAQSLGQSSNTSTLVTLYASFSFFGRLLSAGPDYIRNKLYFARTGWLSIALIPTPVAFFLLAASDSLLALQTGTALIGLSSGFIFAAAVSVTSELFGPNSVGVNHNILITNIPIGSLLYGFLAALVYDASSHSTPGNLLVSDSVVCMGRECYFWTFVWWGCISVLGLASSILLFLRTKHAYDHFEKHRMSTQSIVS* 608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g2853 607 MobiDBLite consensus disorder prediction 1 25 - -
Pvu3g2853 607 Pfam Nodulin-like 42 287 IPR010658 -
Pvu3g2853 607 Gene3D MFS general substrate transporter like domains 4 220 IPR036259 -
Pvu3g2853 607 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 25 607 - -
Pvu3g2853 607 MobiDBLite consensus disorder prediction 1 27 - -
Pvu3g2853 607 Gene3D MFS general substrate transporter like domains 382 597 IPR036259 -
Pvu3g2853 607 SUPERFAMILY MFS general substrate transporter 279 590 IPR036259 -
Pvu3g2853 607 SUPERFAMILY MFS general substrate transporter 12 223 IPR036259 -
Pvu3g2853 607 PANTHER NODULIN-LIKE/MFS TRANSPORTER 25 607 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g2853 Pvu-Chr3 50263068 50268422 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g2853 1 604 Nodulin-like Gene Family AT1G31470 57.516 0.0 626
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g2853 - - gmx:100803546 1018.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g2853 3 50263068 50268422 Pvu3g2853 3 50263068 50268422 ECH
Pvu2g1284 2 25082735 25088808 Pvu3g2853 3 50263068 50268422 PCT