Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g2835 ATGGATGGGGTCGCACGTGCGGACAAGGCTCCGTCCACGGACTTGGCCTCGGAGTGGCGTCCCCGCGGCTCTGCGTTCGCGCCTTGTGTGCCTAAGCCTCAAGAAGGAGCTTCTGCTGCTGCTGTTGAGAAGCCGCAACCGTTTCGCATGGTTGTGAGAAAGCCCTTGGTGGCTAGATTGACCAAGGAAATAGTTCAAACATACCAAATATGCAATCCACAGTTTAAATATTCTGAAGATCTAAATCCAAAAAGATTTTTGACCAGCCCGTCAGTTGGAGTGCTTAATGATGGCTATGATAATGTAAACTCAGATCTTATCTTGACAGTGAATTTAGTCTTGAACCATTTAGAGAAAAATAAAAGATATATTGTCAAAGATCTCCTTGGCCATGGGACATTTGGACAAGTGGCTAAAGTCTGGGATTCAGATACCAACAGTTTTGTTGCCGTGAAAATCATTAAAAACCAACCTGCATACTATCAACAAGCATTGGTTGAAGTAACTATCTTAACAACGTTAAATAAGAAGTATGATCCTGAGGATAAGCATCACATTGTTCGTATATATGATTATTTTGTATATCAACGGCATTTGTGCATTTGCTTTGAATTGTTGGACACAAACTTGTATGAGCTTATCAAGATGAATCATTTTAGGGGATTATCCCTTGGTATTGTTCAGCTATTCTCTAAGCAGATTTTATGCGGACTTGCTCTGCTAAAAGAGGCTGGAATTATTCATTGTGATCTGAAGCCAGAAAACATACTTTTATGTACGAGCACTGTGAAGCCAGCAGAAATAAAAATTATTGACTTTGGATCAGCATGCATGGAAAACCGCACTGTTTACTCTTATATTCAGAGTCGATACTATAGATCACCTGAGGTTCTTCTTGGATATCAATACACAACAGCTATTGATATGTGGTCCTTTGGGTGCATAGTGGCGGAATTGTTTCTTGGATTACCATTATTCCCTGGGGCTTCAGAATTTGATCTTTTGAAACGGATGATTGAAATTCTTGGAGGACAACCACCTGATTATGTACTAAGGGATGCCAAAAACTCAAGTAAATTCTTTAAGTGCATTGGGAGTCTCCAGAACATAGAGAGCAGTGAGAGTTCCAAAAATGGAAGAAGTGTTTATCAAGCATTGACAGTGGAAGAATACGAAACTAGAGAATTGAAGAAGCCATCAATTGGAAAAGAGTATTTTAATCATATGAATCTAGAGGCAATTGTTGCCAACTATCCTTACAGAAAAAACCTACCTAAAGAAGATATTGTCAAAGAAAGTCAAATACGACTGGCTCTTATTGATTTTTTGAAAGGGCTTGTTGAATTGGATCCTTTAAAGCGCTGGTCACCTGTTCAGGCTTCAAAACACCCTTTTGTAACTGGGGAACCTTTTACACATCCTTTTAAGCCTCCCCCTGAGACTCCTCAAATGCCCGTAGTTCAAAATATCAAGGTGGATAATCATCCAGGAGGAGGACACTGGTTTGCTGCCGGTCTATCACCTAATGTTCAGGGCAAAAGCCGAGCTTCACTCTATAGCAGTCCACATTTTCAGATGGTTCAACATCAGCCTGCTAATAGTTATGGGAGTGTAGGAAGCCATGGGAGCTATAATGACAGTATTGGGCTTGGAAGCAGCTATGGAAGTTATGGAGAAAGCAGTAACATGTTTGCTTACTATTCACCTATTGCTCCATCTGGTATGAACATGCACAATCAGGGCAGTATGTCAATGCTTGGGAATAGTCCTGATGCAAGGAGAAGAGTTAAATACCAACCTGGGAATGGGTTGGGCATAAGTCCATCAGCTGGAAATTTTGCTCCCCTGCCCCTTGGTGCCAGCCCTTCTCAATTTACTCCACCAAGTTCCTATAGTCAGGTTTCAGTTGTTTCTCCAGGACACTTTGGACCAACATCTCCTGCAAGAGGAACTTCTCACGGATCACCTTTAGGCAAGACAGCTGCAATTAGCCAGTTTAATAGAAGAAAAAACTGGGGACATTCTGGAAGTCCTCAAACTCAAGAAACAACATTTTCTTCAAATTGGCAAGGTCAATATCCTGACAGCACAAGCCATACTGAGGGAACATCACAACCTCTTGGCAGTTCGCCATCATATCTACAGTCAAATTGTATTCCTGGAAACCGGAAACCACGAGGAAGTGGAGGATTTTCTGCTAATCCGAACATTTCATGTTTTAAGCCCGGTGCTAATTTGAACTCACAATCAACAGAATTGGGTCATGACAATGCAGAGACAGGCATTTCATTGCCCGATCCTGGCGACTGGGACCCTAATTACAGTGATGAATTACTTCTTCAAGAGGATGGTTCAGATGAAAGCTGTTTGGCAAATGAGTTTGGCAGAAGTATGAATCTTGGATCTACTGAAACATGGGCTGGATTTGGAAGGTTCAACCATGAGTCCAGCTCAAACACTCCAATAATCATGCAAAGACAAAATGGACCAAGTCAATCATTTACTAATGTCGAGATGGGTAGCCTTCCAACGCATGATCTTCAAGCAGCATATGCACCCTCTCTGTCTAAGCAGTTTCATCTCATGCCTCATATTTTGCATAATTCTCCAAGCCGTTTTGGACACCAATCTGTTCAGAGATATACACATGGTAGACCCCCCCAGGCTGCTGATTGGAATCAAATTAAAATTCAGGCTCCTTCTGGTTTCAGCAGTGTGGGTCCTCGTTCTCCTAGGGGTAACTCATTCACCAACAGTATGACATGGGGGCGCAGAATGGATCCTCCGGTATCAAGCATGCCTCCGACATCCCGCACAAGAAAAGATTATGCAAGGATAGACTAG 2844 0.4226 MDGVARADKAPSTDLASEWRPRGSAFAPCVPKPQEGASAAAVEKPQPFRMVVRKPLVARLTKEIVQTYQICNPQFKYSEDLNPKRFLTSPSVGVLNDGYDNVNSDLILTVNLVLNHLEKNKRYIVKDLLGHGTFGQVAKVWDSDTNSFVAVKIIKNQPAYYQQALVEVTILTTLNKKYDPEDKHHIVRIYDYFVYQRHLCICFELLDTNLYELIKMNHFRGLSLGIVQLFSKQILCGLALLKEAGIIHCDLKPENILLCTSTVKPAEIKIIDFGSACMENRTVYSYIQSRYYRSPEVLLGYQYTTAIDMWSFGCIVAELFLGLPLFPGASEFDLLKRMIEILGGQPPDYVLRDAKNSSKFFKCIGSLQNIESSESSKNGRSVYQALTVEEYETRELKKPSIGKEYFNHMNLEAIVANYPYRKNLPKEDIVKESQIRLALIDFLKGLVELDPLKRWSPVQASKHPFVTGEPFTHPFKPPPETPQMPVVQNIKVDNHPGGGHWFAAGLSPNVQGKSRASLYSSPHFQMVQHQPANSYGSVGSHGSYNDSIGLGSSYGSYGESSNMFAYYSPIAPSGMNMHNQGSMSMLGNSPDARRRVKYQPGNGLGISPSAGNFAPLPLGASPSQFTPPSSYSQVSVVSPGHFGPTSPARGTSHGSPLGKTAAISQFNRRKNWGHSGSPQTQETTFSSNWQGQYPDSTSHTEGTSQPLGSSPSYLQSNCIPGNRKPRGSGGFSANPNISCFKPGANLNSQSTELGHDNAETGISLPDPGDWDPNYSDELLLQEDGSDESCLANEFGRSMNLGSTETWAGFGRFNHESSSNTPIIMQRQNGPSQSFTNVEMGSLPTHDLQAAYAPSLSKQFHLMPHILHNSPSRFGHQSVQRYTHGRPPQAADWNQIKIQAPSGFSSVGPRSPRGNSFTNSMTWGRRMDPPVSSMPPTSRTRKDYARID* 948
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g2835 947 MobiDBLite consensus disorder prediction 901 947 - -
Pvu3g2835 947 PANTHER DUAL SPECIFICITY PROTEIN KINASE 44 849 - -
Pvu3g2835 947 MobiDBLite consensus disorder prediction 648 722 - -
Pvu3g2835 947 PANTHER BNAC04G29850D PROTEIN 44 849 - -
Pvu3g2835 947 SUPERFAMILY Protein kinase-like (PK-like) 118 489 IPR011009 -
Pvu3g2835 947 SMART serkin_6 123 466 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu3g2835 947 ProSitePatterns Serine/Threonine protein kinases active-site signature. 246 258 IPR008271 GO:0004672|GO:0006468
Pvu3g2835 947 MobiDBLite consensus disorder prediction 618 730 - -
Pvu3g2835 947 ProSitePatterns Protein kinases ATP-binding region signature. 129 152 IPR017441 GO:0005524
Pvu3g2835 947 MobiDBLite consensus disorder prediction 581 604 - -
Pvu3g2835 947 Gene3D Transferase(Phosphotransferase) domain 1 204 467 - -
Pvu3g2835 947 CDD PKc_YAK1 123 466 - -
Pvu3g2835 947 Pfam Protein kinase domain 124 466 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu3g2835 947 MobiDBLite consensus disorder prediction 623 640 - -
Pvu3g2835 947 Gene3D Phosphorylase Kinase; domain 1 88 203 - -
Pvu3g2835 947 ProSiteProfiles Protein kinase domain profile. 123 466 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu3g2835 947 MobiDBLite consensus disorder prediction 901 925 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g2835 Pvu-Chr3 50152318 50171331 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g2835 122 352 MAP Kinase Gene Family AT3G18040 33.740 3.15e-31 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_DYRK-YAK Pvu3g2835 Pkinase 1e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g2835 K18670 - gmx:100792777 1736.08