Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g2827 ATGGAGAAACTGAAGGTATCTACAAAGCATGATTCTGATGGCAGCAGTGATCAGACAGATTCATTTCCAATATTTGAATTACGTGAGAGTCAAAATGTTGCTCAGCAGAGGATCAGAAGAGAGGAAGATGATACAAAAGCTGTGAAATTGGATGGAGGTTCTGCAATTGCTTTCTCTAATTCGGTAAGCAATAAGGAATCTGCCAACAAGTGGATGGCATTTGCTGGGAAGCCTAATTTTGCAGTTGATGGCAACTCAGCAAAGAAGGATAAAAGTACAACTGAAGACAATTACTTGAGGAATCATCTAAAAGAGAAGTCCTCTTCTGATCAACAGATTTTAACTGAAGCAACCATAGCTGAGAGAGCTGCTGAATGGGGTGTTGTGGTGAACACTGGGAACTTCAGAGCAATGGGGGAAGAAAATACCGGTGCCTCTTTTGATGGTGACAGAACCAGAAACTTGTCAGATAGATTTGCTGAATCAACAAGGACTTCTGGGGAGTCAAATTTTGGATCTGATTCAACATCTGGATTGTTCCCAAGGGTGTCACAAGAGTTGAAGGAAGCATTGGCAACACTGCAACAGACATTTGTTGTCTCAGATGCAACAAAACCAGACTGCCCAATCATGTATGCCAGTAGTGGCTTTTTCAGTATGACTGGCTATTCTTCAAAGGAGATCATTGGAAGGAATTGTCGATTTCTTCAGGGACCTGATACAGACAAGAATGAAGTGGACAAAATTCGTGATGCAATTAGAAATGGGAGAAGTTATTGTGGCAGACTATTAAACTACAAGAAAAATGGAACTCCATTCTGGAATCTTCTCACTGTCACCCCCATCAAAGATGATAAAGGCAATACTATCAAATTCATCGGAATGCAGGTTGAGGTGAGCAAGTACACTGAAGGAGTGAATGAAAAGGCATTACGACCAAATGGGTTACCCAAGTCATTAATTCGATATGATGCTCGTCAGAAGGAGACAGCTATGGGTTCCATCACCGAGGTTGTCCAAACTGTTAAGGACCCAAAATCTATTATCAATAAGAGGAATGATGATACTGCCTCCAAGCAAGAAGAGGAAGAGAAAATGAATCTTGATTTTGTTTTGCCAAAGTCTGCTGATGCTGGGAATACAAGCACACCTGGTAGACAACCTTCTCCACTCAACATCCAAAGCATGAGTTCTAATCAGGAAAAGAGCAGGACATCAAGATCAGGACGGATTTCTTTAAAGGGTTTTAAAGGGAAATCACAGAGTTCTGCTGGGAGAGATGAGGAGAAGACCATTGTTGAACCTGAGGTTTTGATGACCAAAGAAATAGAGTGGTCGAACAATTGGGAGCACTCACTAAGAGAGAGGGACATAAGGCAGGGAATTGATCTAGCAACCACATTGGAGAGGATAGAAAAGAACTTCGTGATTTCTGATCCTAGACTGCCAGATAACCCAATTATATTTGCATCTGATAGCTTTCTTGAACTTACGGAATATACAAGAGAAGAAATTTTGGGACGAAATTGTCGGTTTCTTCAAGGACCAGAGACAGACCAGGCAACAGTTTCAAGGATAAGGGATGCTATCAGAGAACAGAGGGAAATCACTGTTCAGTTGATCAACTATACTAAGAGTGGAAAGAAGTTTTGGAATTTGTTTCACCTGCAACCTATGCGTGACCAAAAGGGTGAACTTCAATACTTCATTGGCGTTCAACTAGATGGAAGTGATCATGTGGAACCCTTAAAAAACCGCCTGTCTGAGACAACTGAGTTTCAGAGTGCCAAGCTGGTGAAAGCAACTGCAGAAAATGTGGATGAAGCTGTCCGAGAACTTCCCGATGCCAACTTGAGACCAGAAGATTTGTGGGCAATTCATTCCCAACCTGTCTTTCCACGACCTCACAAAAGGGATAATCCTTCTTGGATAGCAATACAAAAGGTTGTTGCAAGAGGCGAAAAAATTGGCCTCCAACATTTTGTGCCCATAAGGCCACTAGGTTGTGGAGATACTGGCAGTGTTCATTTGGTGGAACTCAAAGGTACTGGTGAACTATATGCAATGAAAGCAATGGAAAAGACTGTCATGCTAAATCGTAATAAGGTTCACCGATCATGCATTGAGAGAGAGATTATATCATTATTGGATCATCCTTTTCTTCCAACACTATACACCTCATTTCAGACTTCTACACATGTATGTTTGATTTCTGACTTCTGCCACGGGGGAGAATTGTTTGCATTGCTTGACAAGCAACCAATGAAGATTTTCAAAGAAGAATCAGCAAGATTCTATGCGGCAGAGGTTGTCATTGGCTTGGAATATCTCCACTGTCTAGGTATAATTTATCGTGACTTAAAGCCTGAAAATATCTTACTTCAGAAGGATGGTCACGTTGTATTAACTGATTTTGATCTATCATCTATGACATCGTGTAAACCCCAGGTTGTGAAGCAAGCATTACCTGGTAAAAGAAGATCACGAAGTGGACCACCACCAATACTCGTTGCAGAGCCAGTTACACAATCAAACTCGTTTGTTGGAACTGAAGAATATATTGCCCCTGAAATTATAACTGGAGCTGGGCATACTAGCGCTATAGATTGGTGGACCCTTGGTATCTTATTGTATGAGATGCTCTATGGCCGTACACCATTTAGAGGAAAGAATAGACAGAAGACATTTTCCAACATCTTACACAAGGATCTTACCTTTCCAAGCAGCATCCCGGCTAGTCTTGCAGCCAGGCAGTTGATTAATGCACTTTTGCAGAGAGACCCAACAAGTCGTCTAGGTTCAACCACTGGTGCAAATGAAATCAAACAACACCCTTTTTTCCGTGGAATCACTTGGCCTCTAATCCGTAACATGACTCCACCTCCATTAGAAGTTCCTCTGAAATTGATAGGAAAAGAACCAGTGGCAAAGGATATAAAGTGGGAAGATGATGGAGTGCTAGTGAACTCCATTGATATGGACATCTTTTGA 2991 0.4159 MEKLKVSTKHDSDGSSDQTDSFPIFELRESQNVAQQRIRREEDDTKAVKLDGGSAIAFSNSVSNKESANKWMAFAGKPNFAVDGNSAKKDKSTTEDNYLRNHLKEKSSSDQQILTEATIAERAAEWGVVVNTGNFRAMGEENTGASFDGDRTRNLSDRFAESTRTSGESNFGSDSTSGLFPRVSQELKEALATLQQTFVVSDATKPDCPIMYASSGFFSMTGYSSKEIIGRNCRFLQGPDTDKNEVDKIRDAIRNGRSYCGRLLNYKKNGTPFWNLLTVTPIKDDKGNTIKFIGMQVEVSKYTEGVNEKALRPNGLPKSLIRYDARQKETAMGSITEVVQTVKDPKSIINKRNDDTASKQEEEEKMNLDFVLPKSADAGNTSTPGRQPSPLNIQSMSSNQEKSRTSRSGRISLKGFKGKSQSSAGRDEEKTIVEPEVLMTKEIEWSNNWEHSLRERDIRQGIDLATTLERIEKNFVISDPRLPDNPIIFASDSFLELTEYTREEILGRNCRFLQGPETDQATVSRIRDAIREQREITVQLINYTKSGKKFWNLFHLQPMRDQKGELQYFIGVQLDGSDHVEPLKNRLSETTEFQSAKLVKATAENVDEAVRELPDANLRPEDLWAIHSQPVFPRPHKRDNPSWIAIQKVVARGEKIGLQHFVPIRPLGCGDTGSVHLVELKGTGELYAMKAMEKTVMLNRNKVHRSCIEREIISLLDHPFLPTLYTSFQTSTHVCLISDFCHGGELFALLDKQPMKIFKEESARFYAAEVVIGLEYLHCLGIIYRDLKPENILLQKDGHVVLTDFDLSSMTSCKPQVVKQALPGKRRSRSGPPPILVAEPVTQSNSFVGTEEYIAPEIITGAGHTSAIDWWTLGILLYEMLYGRTPFRGKNRQKTFSNILHKDLTFPSSIPASLAARQLINALLQRDPTSRLGSTTGANEIKQHPFFRGITWPLIRNMTPPPLEVPLKLIGKEPVAKDIKWEDDGVLVNSIDMDIF* 997
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g2827 996 ProSiteProfiles Protein kinase domain profile. 661 947 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu3g2827 996 ProSiteProfiles PAS repeat profile. 183 256 IPR000014 -
Pvu3g2827 996 PANTHER FLIPPASE KINASE 1-RELATED 136 995 - -
Pvu3g2827 996 SUPERFAMILY Protein kinase-like (PK-like) 639 969 IPR011009 -
Pvu3g2827 996 ProSitePatterns Serine/Threonine protein kinases active-site signature. 782 794 IPR008271 GO:0004672|GO:0006468
Pvu3g2827 996 SMART pas_2 185 254 IPR000014 -
Pvu3g2827 996 SMART pas_2 462 531 IPR000014 -
Pvu3g2827 996 ProSiteProfiles PAC domain profile. 257 311 IPR000700 -
Pvu3g2827 996 PANTHER BNAA02G07840D PROTEIN 136 995 - -
Pvu3g2827 996 MobiDBLite consensus disorder prediction 376 419 - -
Pvu3g2827 996 Gene3D Transferase(Phosphotransferase) domain 1 745 962 - -
Pvu3g2827 996 CDD STKc_phototropin_like 659 970 - -
Pvu3g2827 996 CDD PAS 210 299 IPR000014 -
Pvu3g2827 996 MobiDBLite consensus disorder prediction 347 370 - -
Pvu3g2827 996 TIGRFAM sensory_box: PAS domain S-box protein 210 300 IPR000014 -
Pvu3g2827 996 TIGRFAM sensory_box: PAS domain S-box protein 486 577 IPR000014 -
Pvu3g2827 996 MobiDBLite consensus disorder prediction 346 431 - -
Pvu3g2827 996 Gene3D PAS domain 450 613 - -
Pvu3g2827 996 ProSiteProfiles PAS repeat profile. 460 533 IPR000014 -
Pvu3g2827 996 Gene3D PAS domain 197 368 - -
Pvu3g2827 996 Gene3D Phosphorylase Kinase; domain 1 660 744 - -
Pvu3g2827 996 SUPERFAMILY PYP-like sensor domain (PAS domain) 479 575 IPR035965 -
Pvu3g2827 996 CDD PAS 483 575 IPR000014 -
Pvu3g2827 996 Pfam PAS domain 483 575 IPR000014 -
Pvu3g2827 996 Pfam PAS domain 204 300 IPR000014 -
Pvu3g2827 996 SMART serkin_6 661 947 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu3g2827 996 SUPERFAMILY PYP-like sensor domain (PAS domain) 204 296 IPR035965 -
Pvu3g2827 996 MobiDBLite consensus disorder prediction 1 16 - -
Pvu3g2827 996 SMART pac_2 260 302 IPR001610 -
Pvu3g2827 996 SMART pac_2 537 579 IPR001610 -
Pvu3g2827 996 Pfam Protein kinase domain 664 947 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu3g2827 996 MobiDBLite consensus disorder prediction 1 24 - -
Pvu3g2827 996 ProSitePatterns Protein kinases ATP-binding region signature. 667 690 IPR017441 GO:0005524
Pvu3g2827 996 ProSiteProfiles PAC domain profile. 534 588 IPR000700 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g2827 Pvu-Chr3 50074125 50091400 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g2827 104 995 AGC Kinase Gene Family AT5G58140 73.222 0.0 1310
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Pvu3g2827 Pkinase 1.2e-61 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g2827 K20715 - gmx:100804783 1768.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g2827 3 50074125 50091400 Pvu3g2827 3 50074125 50091400 ECH