Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g2818 ATGGGTAGTAGTGACATGGACAAAACCCCTAAAGAGAAGGAGTCTAAGACACCTCCAGCTACGTCACAGGAGCAGTCTCCACCAACAACTGGCATGGCGACTATTAATCCCGACTGGTCTAACTTTCAGACATATTCTCCCATGCCTCCACACGGTTTCTTGGCATCAAGTCCCCAAGCCCACCCATATATGTGGGGTGTCCAGCATATTATGCCTCCCTATGGCACCCCAGCACATCCCTATGTAGCAATGTATCCCCATGGTGGCATTTATGCCCATCCATCCATTCCTCCGGGGTCTTATCCTTTCAGTCCTTTTGCCATGGCTTCTCCAAATGGTATTGCAGATACATCGGGAAATAACCCAGGCAGCATTGAAGTTGGTGCTAAACCTCCCGAGGTGAAGGAAAAATTACCGGTCAAAAGATCAAAAGAAAGTGCTAGTGGGGGCAGTTTGAATATGTGGATTACAGGAAAAAATAATGATCTTAGTAAAACAACCGGAGAATCTGCTAATGGGATTCATTCCAAAAGTGGCGATAGTGCAAGTGACGGAACTAGTGAAGGAAGTGATGAGAATTCCCAGAATGACTCTCAATTGAAATCCGGGGAGAGGCAGGACTCTTTTGAAGACGAACCATCTCAAAATGGAAGTTCGGCACATGCTCCTCAAAATGGGGTACATAGTAGACCTCAGACACTTGTTAACCAAACTATGCCTATACCTATATCTACTGCAAGTGCTCCTGGAGCAGTTCCTGGTCCCACTACTAATTTAAATATTGGAATGGATTACTGGGGCACGCCAACTTCATCCGCCATTCCTGCACTGCATGGAAAGGTCTCTTCTACTGCAGTTGCTGGAGGAATGATTACTGCTGGGTCAAGAGATGGTGTTCAGTCCCAAATTTGGCTACAGGACGAAAGAGAGCTTAAAAGACAAAGGCGGAAGCAGTCTAATAGGGAATCTGCACGCAGATCCAGGTTACGGAAGCAGGCTGAATGCGATGAACTAGCTCAGCGTGCTGACGTTTTGAAAGAAGAAAATGCCACTCTCCGAGCAGAAGTAAGCAGGATCAGGAGTGAGTTCGAGCAGCTACGTTCAGAGAATGCTTCCCTCAAGGAGAGACTTGGGGAGATACCCGGTGTTGCTACGCCTGGGAACGAGGATGTTAGGTCTGGCCAGAATGATCAGCATGTTAGTAATGACACTCAACAAAGTCGTCAGAAAGAGGCTGTGCAGGGTGTTCATTAG 1254 0.4721 MGSSDMDKTPKEKESKTPPATSQEQSPPTTGMATINPDWSNFQTYSPMPPHGFLASSPQAHPYMWGVQHIMPPYGTPAHPYVAMYPHGGIYAHPSIPPGSYPFSPFAMASPNGIADTSGNNPGSIEVGAKPPEVKEKLPVKRSKESASGGSLNMWITGKNNDLSKTTGESANGIHSKSGDSASDGTSEGSDENSQNDSQLKSGERQDSFEDEPSQNGSSAHAPQNGVHSRPQTLVNQTMPIPISTASAPGAVPGPTTNLNIGMDYWGTPTSSAIPALHGKVSSTAVAGGMITAGSRDGVQSQIWLQDERELKRQRRKQSNRESARRSRLRKQAECDELAQRADVLKEENATLRAEVSRIRSEFEQLRSENASLKERLGEIPGVATPGNEDVRSGQNDQHVSNDTQQSRQKEAVQGVH* 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g2818 417 Coils Coil 328 376 - -
Pvu3g2818 417 MobiDBLite consensus disorder prediction 212 230 - -
Pvu3g2818 417 CDD bZIP_plant_GBF1 313 363 IPR045314 GO:0003700|GO:0006355
Pvu3g2818 417 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 310 373 IPR004827 GO:0003700|GO:0006355
Pvu3g2818 417 SMART brlzneu 308 372 IPR004827 GO:0003700|GO:0006355
Pvu3g2818 417 PANTHER G-BOX-BINDING FACTOR 3-RELATED 1 417 IPR044827 GO:0003700|GO:0006355|GO:0043565
Pvu3g2818 417 MobiDBLite consensus disorder prediction 389 417 - -
Pvu3g2818 417 MobiDBLite consensus disorder prediction 1 18 - -
Pvu3g2818 417 Pfam bZIP transcription factor 308 370 IPR004827 GO:0003700|GO:0006355
Pvu3g2818 417 MobiDBLite consensus disorder prediction 370 417 - -
Pvu3g2818 417 MobiDBLite consensus disorder prediction 115 230 - -
Pvu3g2818 417 SUPERFAMILY Leucine zipper domain 311 368 IPR046347 GO:0003700|GO:0006355
Pvu3g2818 417 MobiDBLite consensus disorder prediction 1 41 - -
Pvu3g2818 417 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 315 330 IPR004827 GO:0003700|GO:0006355
Pvu3g2818 417 PANTHER BZIP TRANSCRIPTION FACTOR FAMILY PROTEIN 1 417 - -
Pvu3g2818 417 MobiDBLite consensus disorder prediction 310 332 - -
Pvu3g2818 417 Pfam Disordered region downstream of MFMR 136 275 - -
Pvu3g2818 417 Pfam G-box binding protein MFMR 1 97 IPR012900 -
Pvu3g2818 417 MobiDBLite consensus disorder prediction 146 202 - -
Pvu3g2818 417 MobiDBLite consensus disorder prediction 19 41 - -
Pvu3g2818 417 Gene3D - 311 364 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g2818 Pvu-Chr3 49963099 49970518 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g2818 1 381 bZIP Transcription Factor Family AT2G35530 63.077 2.13e-157 448
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Pvu3g2818 MFMR_assoc 3.5e-54 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g2818 K09060 - gmx:100101912 745.347
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g1401 2 26797730 26810044 Pvu3g2818 3 49963099 49970518 PCT