Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g2816 ATGACAACCCTTTGTGTGTTGCTCTTTCTGGGATTCTTGTGGGCTGAAATTCATGTCATTTCTTCATACACTGAAACTCAAGATGTTGTTGCACTCAGATCATTAAAAGATGAATGGCACAATACACCGCCCAGCTGGGACAGATCAGATGACCCCTGTGGAGAACCATGGGAAGGAGTGACCTGCAACAAATCAAGGGTTACTTCATTAGGATTGTCAACCATGGGCCTGAAGGGGAAATTAAGTGGAGATATTGGCCAACTTTCAGAATTGAGATCCTTGGATTTATCCTTTAATAGAGATTTAACAGGTTCTCTCTCTCCAGAGTTAGGAGAACTAAGCAAGCTAAATATACTGATTTTGGCTGGTTGCGGCTTCAGTGGTAATATTCCAGATGAATTAGGAAATCTTTCAGAGCTATCCTTCCTGGCTTTAAACTCAAACAACTTCACTGGAAAAATACCTCCTTCATTGGGTAAACTCTCCAAAATTTATTGGTTGGACTTGGCAGACAATCAGCTGACAGGGCCTATCCCAGTTTCAACCTCCACATCCCCTGGATTAGACCTTCTTTTAAAGGCTAAACACTTCCATTTCAATAAGAACCAGCTTTCAGGTTCCATACCCCCCAAGCTTTTCAGCTCAGAGATGATACTCATACACATATTGTTTGATGGGAATAAATTAAGTGGGACTATACCTTCAACATTGTTACAAGTCAAGACTCTTGAGGTTCTACGGCTTGATAGAAATTTCCTGACAGGAGAGGTCCCATCAAATCTCAACAACCTTACAACCATCAGTGAATTGAATTTAGCTCGTAATAATTTCACAGGTCCTTTGCCTGACTTAACTGGAATGGATACCCTCAACTATGTAGATCTTAGTAACAACTCTTTTGATCCATCTGATGCTCCAACTTGGTTCACAACTCTACCATCACTAACCACTCTTGTTATGGAGTTTGGATCGCTTCAAGGTCGTCTTCCATCGAAACTATTTGAAATTCCTCAAATACAGCAAGTGAAGCTACGACACAATGCATTGAACGATACATTGAACATGGGTGAAAACATTTGTCCCCAATTGCAGCTTGTAGATTTACAACAAAATGAGATTTCCTCAGTGACCCTCAGTTCACAATACAAAAATACATTGATTCTAATAGGAAATCCAGTGTGCAGTAGTGCTCTCTCGAATACAAATTACTGCCAAGTTCAGCTGCAGGATAAGCAACCCTATTCCACCAGCTTGGCTAATTGTGGAGGCAAATCTTGTCCTCCTGATCAAAAGCTCAGCCCCCAAAGTTGTGAATGTGCCTATCCATATGAAGGAATCATGCACTTTAGAGCACCCTCATTCAGAGAACTGTCCAATGTAAATACTTTCCATTCACTTGAAATGAGCCTATGGGTGAAATTGGGTCTAACTCCTGGCTCAGTTTCTTTACAAAACCCCTTCTTTGATAGTAATGACTATCTTCTAGTGCAACTATCACTCTTTCCATCAACAGGCCAATACTTTAATAGGTCAGAAGTTCAAAGAATTGGGTTTGATTTAAGTAATCAAACTTACAAGCCACCAAAAGAGTTTGGACCCTATTACTTCCTTGCATATTCTTATCCTTTTTCAGGTTCTCACAGAGGAGCTTCTCTTAGAAAAGGTGTTGTTATTGGGATAGCAATTGGCTCCACATTTCTGGTTCTGAGCCTCATAGGATTAGCTATTTATGCGATTCTGCAAAAGAAGCGTGCAGAGAGAGCCATTGGATTAAGTAGACCATTTGCATCATGGGCACCAAGTGGGAAGGATAGTGGAGGTGCACCACAATTAAAGGGAGCAAGATGGTTCTCTTATGATGATCTCAAAAAGTGCACCAGCAATTTCTCTGAACACAATGAGATAGGCTCTGGAGGCTATGGCAAGGTGTACAAAGGTGTTCTTCCTGATGGGAAAACGGTTGCAATCAAACGAGCTCAGCAAGGATCAATGCAAGGAGGCCAAGAGTTCAAGACTGAAATTGAGTTGCTTTCAAGAGTTCACCACAAGAATCTTGTTGCCCTTGTGGGGTTCTGCTTCGAACAAGGGGAACAGATGTTGGTTTACGAATTTATATCCAATGGAACACTTAGGGAGAGTTTGTCAGGAAAATCTGACATTCATCTTGACTGGAAGAGGAGACTGCGCATTGCTCTTGGTTCAGCCAGAGGACTTGCATACTTACACGAACTGGCCAACCCTCCCATAATCCACAGAGATGTGAAGTCGACTAATATCTTGCTGGATGAAAATTTGACAGCAAAGGTTGCAGATTTTGGCCTGTCCAAACTTGTATCAGACAGTGAGAAAGGCCATGTTTCCACTCAGGTTAAAGGGACATTGGGTTATCTGGATCCAGAGTATTATATGACCCAACAACTCACTGAGAAGAGTGATGTGTACAGTTTTGGAGTAGTGATGCTTGAACTAATAACCTCAAGACAACCAATTGAGAAGGGTAAGTACATTGTCCGCGAGGTGCGCACCCTGATGAACAAGAATGATGAAGAACACTATGGTTTGAGGGAACTGATGGATCCAGTGGTGAGGAACACACCGACCCTCATAGGATTTGGGAGGTTCCTAGAGTTGGCAATGCAATGTGTTGAGGAATCAGCTGCAGACCGTCCAACAATGAGTGAAGTTGTGAAAGCACTTGAAACCATTTTGCAGAATGATGGTATGAACACAAACTCCACATCTGCATCCTCATCTGCCACTGACTTTGGTGTTTCCAAGGGAATGAGGCATCCCTACATTGATGCTTCTTTTAACAAGAACAATGGCAATGATAGTAGTAATAGTGGCTTTGACTACAGCGGAGGGTACACAATTTCTACAAAAGTCGAACCCAAATAG 2898 0.4199 MTTLCVLLFLGFLWAEIHVISSYTETQDVVALRSLKDEWHNTPPSWDRSDDPCGEPWEGVTCNKSRVTSLGLSTMGLKGKLSGDIGQLSELRSLDLSFNRDLTGSLSPELGELSKLNILILAGCGFSGNIPDELGNLSELSFLALNSNNFTGKIPPSLGKLSKIYWLDLADNQLTGPIPVSTSTSPGLDLLLKAKHFHFNKNQLSGSIPPKLFSSEMILIHILFDGNKLSGTIPSTLLQVKTLEVLRLDRNFLTGEVPSNLNNLTTISELNLARNNFTGPLPDLTGMDTLNYVDLSNNSFDPSDAPTWFTTLPSLTTLVMEFGSLQGRLPSKLFEIPQIQQVKLRHNALNDTLNMGENICPQLQLVDLQQNEISSVTLSSQYKNTLILIGNPVCSSALSNTNYCQVQLQDKQPYSTSLANCGGKSCPPDQKLSPQSCECAYPYEGIMHFRAPSFRELSNVNTFHSLEMSLWVKLGLTPGSVSLQNPFFDSNDYLLVQLSLFPSTGQYFNRSEVQRIGFDLSNQTYKPPKEFGPYYFLAYSYPFSGSHRGASLRKGVVIGIAIGSTFLVLSLIGLAIYAILQKKRAERAIGLSRPFASWAPSGKDSGGAPQLKGARWFSYDDLKKCTSNFSEHNEIGSGGYGKVYKGVLPDGKTVAIKRAQQGSMQGGQEFKTEIELLSRVHHKNLVALVGFCFEQGEQMLVYEFISNGTLRESLSGKSDIHLDWKRRLRIALGSARGLAYLHELANPPIIHRDVKSTNILLDENLTAKVADFGLSKLVSDSEKGHVSTQVKGTLGYLDPEYYMTQQLTEKSDVYSFGVVMLELITSRQPIEKGKYIVREVRTLMNKNDEEHYGLRELMDPVVRNTPTLIGFGRFLELAMQCVEESAADRPTMSEVVKALETILQNDGMNTNSTSASSSATDFGVSKGMRHPYIDASFNKNNGNDSSNSGFDYSGGYTISTKVEPK* 966
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g2816 965 Gene3D Phosphorylase Kinase; domain 1 603 704 - -
Pvu3g2816 965 Pfam Protein tyrosine and serine/threonine kinase 632 899 IPR001245 GO:0004672|GO:0006468
Pvu3g2816 965 SUPERFAMILY L domain-like 38 395 - -
Pvu3g2816 965 PANTHER LRR RECEPTOR-LIKE KINASE 1 935 - -
Pvu3g2816 965 Gene3D Ribonuclease Inhibitor 184 284 IPR032675 -
Pvu3g2816 965 ProSitePatterns Serine/Threonine protein kinases active-site signature. 749 761 IPR008271 GO:0004672|GO:0006468
Pvu3g2816 965 Gene3D Transferase(Phosphotransferase) domain 1 705 926 - -
Pvu3g2816 965 Gene3D Ribonuclease Inhibitor 285 433 IPR032675 -
Pvu3g2816 965 ProSitePatterns Protein kinases ATP-binding region signature. 635 657 IPR017441 GO:0005524
Pvu3g2816 965 Gene3D Ribonuclease Inhibitor 24 183 IPR032675 -
Pvu3g2816 965 Pfam Leucine rich repeat N-terminal domain 27 63 IPR013210 -
Pvu3g2816 965 SMART serkin_6 629 902 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu3g2816 965 CDD STKc_IRAK 635 902 - -
Pvu3g2816 965 ProSiteProfiles Protein kinase domain profile. 629 903 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu3g2816 965 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 1 935 - -
Pvu3g2816 965 SUPERFAMILY Protein kinase-like (PK-like) 615 913 IPR011009 -
Pvu3g2816 965 MobiDBLite consensus disorder prediction 936 965 - -
Pvu3g2816 965 MobiDBLite consensus disorder prediction 936 955 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g2816 Pvu-Chr3 49947158 49954464 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g2816 2 965 Receptor kinase-like Gene Family AT1G79620 70.191 0.0 1413
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Pvu3g2816 PK_Tyr_Ser-Thr 7.6e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g2816 - - gmx:100792249 1727.61