Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g2785 ATGAGAAAGATTTGGTTTCTTGTCCTCGTGATGTTCTACCATGGCTTTCCTTCAATGGGAATCAGCAGTGTTTATGGAAGACCAAGAATTGTTAACGTAGGAGCACTTCTGTCCTTCAATTCAACAGTTGGGAGAGTGGCTAAAGTTGCTATAGAAGCTGCAGTGGATGATGTAAACTCAGATCCAACTATTCTTAATGGAACCAAGCTAAAGATTTTAACGTTGGACACAAAATTATCCGCTGGGTTCCTAGGAATAGTTGACTCATTAAGATTGATGGAGAATGACACTGTGGCCATAATTGGTCCCCAGTTCTCTGTGATGGCTCATGTGATTTCACATATTGCAAATGAGATGCAAGTGCCTCTCCTTTCATTTGCAGCAACTGACCCTACGCTGACTTCACTACAGTTCCCATATTTTGTTAGGACAACACAGAGTGATCTGTATCAGATGACTGCTGTGGCAGAAATTGTTGATCACTTTCAATGGAGAGATGTCATTGCCATTTACATTGATGATGATCATGGAAGAAATGGGGTGTCTGCTTTAGGGGATAAGCTAGCAGAGAAACGTGGTAAAATATCACACAAAGCACCATTTAAGCCTGGTAACATTACTCGGGAGGAAATAAACAATGCATTAGTTAAGATAGGTTTAATGGAATCAACAGTAATAGTACTTCACATATACCCTTCTTTTGGTCTAGATGTATTGAATGTGGCTCGGTCACTTGGCATGATGGAAAGTGGCTATGTGTGGATAGCCACAGATTGGCTTTCTACATTGTTAGATTCAAACCCATCATTGTTCACCACTCAGTCAATGAATGACATTCAAGGAGTTATCACCTTGCGCATGTACACCCCTGAGTCAGAAATCAAAAGAAAATTTAGTTCTAGTTGGAACAAACTGAGCAAGCAAAAGGATCCTGTTGAGGGTCCTTTCGCATTGAACACCTTTGGCTTTTACGCCTATGATACCGTTTGGGTGCTTGCTTCTGCACTTGATGCGTTTTTCAGGAGTGGGGGAACTTTGTCATTTTCAAATGATTCAAGTCTAAACATGTTAAGAGGGGACAGTCTTCACCTTGATACTATGGGAGTGTTTCTTCATGGTGGGAAGCTGCTTCAACAGATTTTAGAGGTGAACAGAACTGGTCTAACAGGCCAAATGATGTTTGGTGAAGATGGAAACTTAGTGCATTCATCATATGAAGTGATTAACGTGATAGGCAGTGGAATAAGGAGGATTGGTTATTGGTCTGAAACTTCTGGCCTCCACACTGGGGAGGCTACTAATCATTCCATTTCTAGTGAAGGACTATATAGTGTCATCTGGCCTGGTCAAACTACTCAAACCCCACGTGGGTGGATTTTTTCCAACACTGGAAGAAACTTGAGAATTGGGGTGCCACTTAGAATTAGTTACCGTGAGTTTGTGTCAAGAACTGAGGGAACTGAGGGAACTGAGGGAAATGAGATGTTTGGTGGTTATTGCATAGATGTGTTTACTGCTGCTCTCCACTTGGTGCCTTATCCTGTTCCTTACACGTTTGTTCCATATGGAGATGGTAAAACCAACCCATCAAATTCAAAACTTCTCAATTTGATCACTATTGGGGAGTTTGATGCAGTTGTAGGGGACATTACCATTACCACAAACCGAACTAAGATAGTGGATTTTACACAGCCATATGTTGAGTCGGGGCTAGTGGTTGTGGCACCTATAAGGAAGATGAAATCCAGTGCTTGGGCTTTCCTCAGACCATTCACTCCAATGATGTGGTTTGTGACAGGAATGTTTTTCTTAGTTGTGGGAGCTGTTGTATGGATTTTGGAACGTCGCTTAAATGATGACTTCAGAGGCCCAGCTAGAAGGTTTAGCTTTTCAACCCTCTTTTTTTCTCATCGAGAGAAAACTGTGAGCACCCTTGGTCGCTTAGTGCTGATCATATGGCTGTTTGTGGTTTTGATACTCAACTCAAGCTACATTGCAAGCCTCACCTCCATCCTAACTGTGGAACAGCTCTCTTCCTCAGTTAAGGGAATTGAAAGCTTAGCAACAAGCGATGACCGGATTGGTTTCCCGAGTGGCTCCTTTGCTGAAAATTATCTGACAGAGGAGCTAAACATACACAGATCAAGGCTAGTTCCTCTGAACTCCCCATCAGAATATGAAAAGGCTTTGAAAGATGGCCCTGCTAATGGAGGTGTGACTGCCATAATAGATGAACGTGCATACATGGAACTCTTCCTGGCTACCAGATGTGAATACAGTATTGTTGGCCAAGAGTTCACCAAGATGGGATGGGGCTTTGCCTTCCCAAGAGACTCTCCCCTAGCAATTGACATGTCCACTGCCATCTTAAAACTTTCAGAGAATGGTGGTCTTCAGAGAATTCATGACAAATGGCTACAAGAAGTGCATGCAGCTCAGAGGGTGCAAAACAAGGCATAG 2460 0.4264 MRKIWFLVLVMFYHGFPSMGISSVYGRPRIVNVGALLSFNSTVGRVAKVAIEAAVDDVNSDPTILNGTKLKILTLDTKLSAGFLGIVDSLRLMENDTVAIIGPQFSVMAHVISHIANEMQVPLLSFAATDPTLTSLQFPYFVRTTQSDLYQMTAVAEIVDHFQWRDVIAIYIDDDHGRNGVSALGDKLAEKRGKISHKAPFKPGNITREEINNALVKIGLMESTVIVLHIYPSFGLDVLNVARSLGMMESGYVWIATDWLSTLLDSNPSLFTTQSMNDIQGVITLRMYTPESEIKRKFSSSWNKLSKQKDPVEGPFALNTFGFYAYDTVWVLASALDAFFRSGGTLSFSNDSSLNMLRGDSLHLDTMGVFLHGGKLLQQILEVNRTGLTGQMMFGEDGNLVHSSYEVINVIGSGIRRIGYWSETSGLHTGEATNHSISSEGLYSVIWPGQTTQTPRGWIFSNTGRNLRIGVPLRISYREFVSRTEGTEGTEGNEMFGGYCIDVFTAALHLVPYPVPYTFVPYGDGKTNPSNSKLLNLITIGEFDAVVGDITITTNRTKIVDFTQPYVESGLVVVAPIRKMKSSAWAFLRPFTPMMWFVTGMFFLVVGAVVWILERRLNDDFRGPARRFSFSTLFFSHREKTVSTLGRLVLIIWLFVVLILNSSYIASLTSILTVEQLSSSVKGIESLATSDDRIGFPSGSFAENYLTEELNIHRSRLVPLNSPSEYEKALKDGPANGGVTAIIDERAYMELFLATRCEYSIVGQEFTKMGWGFAFPRDSPLAIDMSTAILKLSENGGLQRIHDKWLQEVHAAQRVQNKA* 820
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g2785 819 CDD PBP1_GABAb_receptor_plant 32 427 IPR044440 -
Pvu3g2785 819 SUPERFAMILY Periplasmic binding protein-like I 27 458 IPR028082 -
Pvu3g2785 819 Pfam Bacterial extracellular solute-binding proteins, family 3 530 807 IPR001638 -
Pvu3g2785 819 Pfam Ligand-gated ion channel 595 691 IPR001320 GO:0015276|GO:0016020
Pvu3g2785 819 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 44 60 - -
Pvu3g2785 819 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 105 133 - -
Pvu3g2785 819 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 325 337 - -
Pvu3g2785 819 Gene3D - 699 811 - -
Pvu3g2785 819 PIRSF IGluLR_plant 1 819 IPR017103 -
Pvu3g2785 819 SUPERFAMILY Periplasmic binding protein-like II 443 806 - -
Pvu3g2785 819 Gene3D - 147 427 - -
Pvu3g2785 819 CDD GluR_Plant 467 806 - -
Pvu3g2785 819 SMART GluR_14 468 808 IPR001320 GO:0015276|GO:0016020
Pvu3g2785 819 Gene3D - 466 583 - -
Pvu3g2785 819 Pfam Receptor family ligand binding region 49 412 IPR001828 -
Pvu3g2785 819 Gene3D - 584 696 - -
Pvu3g2785 819 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 14 808 - -
Pvu3g2785 819 Gene3D - 49 402 - -
Pvu3g2785 819 PANTHER GLUTAMATE RECEPTOR 14 808 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g2785 Pvu-Chr3 49657461 49661031 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g2785 1 808 Ion Channels AT1G42540 57.799 0.0 961
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g2785 K05387 - gmx:100790502 1404.81