Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g2784 ATGTCGTGTTCTTCTTCATCTGGGTCTGAAGAGGACGATGAGGGGTTCGACTCCTACCGGAAAGGAGGGTACCACGCCGTCAGAGTAGGCGATCAGTTCGCCGGCGGCAGGTTCATAGCGCAGAGGAAGCTGGGTTGGGGTCAGTTTTCTACAGTTTGGCTTGCCTATGATACTTCAACATCTGCATATGTTGCTCTTAAGATCCAGAAAAGTGCGGCCCAATTTGTTCAGGCTGCCCTTCATGAAATTGATGTTCTTGCATCCATTTCTAATGACGTTGATGTTAATTCAAAATGTGTGGTCCAGTTGATTGACCACTTTAAGCACGCAGGTCCTAATGGCCAGCACCTTTGCATGGTGCTTGAGTTTCTTGGGGATAGCTTGCTTCGTCTAATCAAGTATAACCGGTACAAAGGCCTTCCATTGAATAAAGTTAGGGAGATTTGCCACTGCATTTTGTTGGGTTTGGATTATTTGCATAGAGAACATGGTATTATCCACACTGACCTAAAACCAGAAAATGTTCTTCTGATTTCTACCATTGATCCTGCCAAAGACCCTGTTAGATCTGAACTCAGCCCAATATTAGAGAGGCCTGAGGGAAACATAAATGGTGGAGTTACTAGTCTTATTGAGAAAAAATTGAAAAGAAGAGCTAGGAGGGCAGTTGCTAAAATCTCTGGAAGAAACGCTTTACTAGGAGGAAATGAAGATCCAAAGTCTGGGAGAAATCTTGATGGGATTGACGTGAGATGCAAGGTGGTGGATTTTGGAAATGCTTGTTGGGCTGATAAGCAGTTTGCAGAAGAAATTCAGACAAGACAGTACAGAGCTCCTGAAGTAATACTGGAGGCTGGCTATTCCTTCTCTGTTGACATGTGGTCTTTCGCTTGCATTGCTTTTGAGCTTGCCACTGGTGATATGTTATTTACGCCCAAAGTTGGACAAGGTTTTAGTGAGAATGAGGATCACCTTGCCCTGATGATGGAACTCCTTGGAAAGATGCCACGGAAGGTTGCTATTGCTGGAGCAAAATCCAAGGATTTCTTTGACAGACATGGGGATCTGAAAAGAATTCGAAGACTAAAGTTTTGGCCACTTAGCAAATTGTTGGTTGAAAGATATAAATTTTCAGAGAGTGATGCTCATGAATTTTCAGAGTTTGTTTTACCACTTCTGGATTTCACCCCTGAGAAAAGGCCAACAGCACAGAAGTGTCTGGAACATCCATGGCTGAAGAAAATGGAAAATGAATCTGGTGTGGAGAATGTGGGTGTTGGGATGAGCAATCTTAAAATGGAGCCTGGAAAGTGA 1314 0.4353 MSCSSSSGSEEDDEGFDSYRKGGYHAVRVGDQFAGGRFIAQRKLGWGQFSTVWLAYDTSTSAYVALKIQKSAAQFVQAALHEIDVLASISNDVDVNSKCVVQLIDHFKHAGPNGQHLCMVLEFLGDSLLRLIKYNRYKGLPLNKVREICHCILLGLDYLHREHGIIHTDLKPENVLLISTIDPAKDPVRSELSPILERPEGNINGGVTSLIEKKLKRRARRAVAKISGRNALLGGNEDPKSGRNLDGIDVRCKVVDFGNACWADKQFAEEIQTRQYRAPEVILEAGYSFSVDMWSFACIAFELATGDMLFTPKVGQGFSENEDHLALMMELLGKMPRKVAIAGAKSKDFFDRHGDLKRIRRLKFWPLSKLLVERYKFSESDAHEFSEFVLPLLDFTPEKRPTAQKCLEHPWLKKMENESGVENVGVGMSNLKMEPGK* 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g2784 437 SUPERFAMILY Protein kinase-like (PK-like) 32 416 IPR011009 -
Pvu3g2784 437 Gene3D Phosphorylase Kinase; domain 1 24 123 - -
Pvu3g2784 437 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 7 418 - -
Pvu3g2784 437 ProSitePatterns Serine/Threonine protein kinases active-site signature. 165 177 IPR008271 GO:0004672|GO:0006468
Pvu3g2784 437 Gene3D Transferase(Phosphotransferase) domain 1 92 412 - -
Pvu3g2784 437 ProSitePatterns Protein kinases ATP-binding region signature. 44 67 IPR017441 GO:0005524
Pvu3g2784 437 Pfam Protein kinase domain 251 412 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu3g2784 437 Pfam Protein kinase domain 40 178 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu3g2784 437 ProSiteProfiles Protein kinase domain profile. 38 412 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu3g2784 437 PANTHER OS07G0472400 PROTEIN 7 418 - -
Pvu3g2784 437 CDD STKc_SRPK 27 412 - -
Pvu3g2784 437 SMART serkin_6 38 412 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g2784 Pvu-Chr3 49650468 49655116 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g2784 4 412 EF-hand Containing Proteins AT5G22840 50.972 5.96e-166 476
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_SRPK Pvu3g2784 Pkinase 1.5e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g2784 K08832 - gmx:100811724 763.451
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g1210 2 23758316 23762339 Pvu3g2784 3 49650468 49655116 PCT