Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g2781 ATGGGAGGCCTATTGCACATGTTCGAGTTCAATCAGGGTAGGATGGCCAAGAAAATTCATGCCCATAAGAACAATAACGATGATCTGGAAACATCTGGAAATGACATGCAGCTGCAAGTAGAAACCTCTCAGGTCCACTGTGCAGAAGGAGAATTACCATACTCCTGTCAAGTAGAAGATGGCTGGTCAAAGAAAATCAGTTACTCAAATGTGGATTCAGTGAAAAAACAGAACAGAGAGGATTTTTCCAAACAATCAGGAGCCATAAATAATGCCCCTAGCCTTGTGGCAAGGTTGATGGGGATGGACACCATGCCATTACCATTAGACACTAAATCTGTAGTTCCACTGGATGAGAGCACACATGAAAATATGGAGAGGAAGATTTCAAAGAAGAAAATGAATAAAGGTTGGGTTGGTAGGGGTTCTTCAAACTTGAATTCTTCTAGCCATTTGGAATTTGATTCATTTTATCAAATCATTGATGATGATGAAGGGGTACATAGTTTTGGAGAGCCGAGGCCAAGGGAACATCCTCAAGAAGAGGAACTCCAAAAATTCAAGAAAGAATTTGAAGCGTATCAAGCAGCAAGGTTTGAGGAGTGGCCGAAGGCTGTTGACATCATAAGTGGTTCTATGAGAAATCTTTCTCAAGAAGAGAACCTGAGCAAGGAGAACATGCAACATATTGCGAGTTCAAAGACAGATAGCCACTCATTTAAGACAAAGCTACCTAATGGGGACCTGATGGAGTCAATCTTATCTAAGAAAAAAGAATCCTTTCCATCAAGAAGTAAAACAAAAAGTAGGGACTTTGAGGAGTCCTTAATGATGAAATCCAGAAGCAGATTATTAGATATATGCGCTTCTCCCACTCAGATAGTTATCTTGAAGCCTGGTTCTGAAAGAATTTGCAATTGCAACCATGAAGAGAATTGCATCAGTTTATCAGGCACTTTACATGGGGGAAAAGGTATAGAAGATTTTCTTGAGGAAGTGAGAGAGCGCTTGAAGTGTGAACTCCAAGGGATTAGAGGTAGTGGAATTGAGTCATCTTTCAATGATAAACTATCTGATGCTAAAGTGGTCAGAGAAAGAACGACCAGAGATGCTGAACCTAATTTACTCCGCTCAGAATCAACAAGATCATACAAAAGTAAAATGCAGCTCAATGGACCGAGTTCCCCAGAATTTTTCAACATAGATACTAGGAGATTCTTGTCAGAGAGGCTAAGAAATACTGTAAAAAATGAATTGAATTTGGACATTCCTGAAGTGGCTTGTTATTTAGACAATGGAAAAGTTAGACTAAAGCAAGATACTGTAAAGGGTGCAAATGACAAGAGCCAGTGGGGAGTTCTAAAAGAGAAAAAAGAATTACAATCGTGTTCCTATAGACATAAATTAGATGACAATGTATTGTTCCACAAGGAGTTGTCTCCTAGGAACCTTGAAAGATCCTTGTCTGCTCCTGCATCAGGAACATCATTTGGAAGGCTTCTTTTGGAGGACCGCCACATTTTAACGGGTGCCCTTATTCAGAGGAAGCTTGAAACTGTTGAAGCAAGACCCGTGGGTGTTAAGAAACAGAAGAAAGATGGATTTAATATTAAAGAAAAACTTTCCAATTTCAAATATACTCTTGGTCTAAGAGGGAAGCTGTTTGGCAGAAGGGTTCAGTCAAAAGTAGAATCACATGGCAGTGAATGTGGTTCAATTTTGAGAGATGTCAGGAGTGGACCAACTATTCTCATGAAATGTGGTGACAAACATGAGAACTCCACCGAGGTACCTCCTAGTCCTGCATCTGTGTGCAGCTGTGCTGATGAAGAACACTGGAGACAGATTGGGTATTCAAGTCTAACATCAACTCCAGATGCATCTTCATTGGATGATATTTTTGTTCCCAAGGTTTTTAGAGATATCAGCTCTGGTTTGAATGAGCTAAAGAGGCAACTGGGTCAACTTGATTCTGACGGCTTTGATGATTTCACTACGAAGCAGGAGCCAACTGAGTCTGAATTAGTTGAATTGGATGATCCAGCAGAATCTTATGTAAGAGATCTGCTTGTTGCCTCTGGTATGTACTTTGGTTCATGGGATAAGTATATTGGCAACTCAGTTTTTGAAGAAGTGGAAGAATCTCATAGGAAATTGGTGAAGGAGGATGAAAGATCCACAAAAGATGATAACAAGAATAAGGTAGAGCACAAGGTTTTGCTTGATTTGTTAAATGAGGCCCTTTCCATTGTTCTTGGACCACCTTTGACATTGTCTAGATTCAGAAGGAAACTAAGCAATTCCTCCTTGCAGCCTCCACCATGTGGAAAGGAACTACTGAAGTTAGTATGGGACATTGTTCGTGTTTCTTTACATCCAACTTCTAACACGTCTCTTTATTCACTTGATAGTTTTGTGGCACAAGATCTAGGATCAAATTCCTGGTCTTGGCTAACAAATGATGAGATTGATACATTGGAAAGAGAGACAGCATGTACAATCGCTGATGATTTGGTTGAAGAATTCACAAAGGATATGCTCTCGTAG 2547 0.4001 MGGLLHMFEFNQGRMAKKIHAHKNNNDDLETSGNDMQLQVETSQVHCAEGELPYSCQVEDGWSKKISYSNVDSVKKQNREDFSKQSGAINNAPSLVARLMGMDTMPLPLDTKSVVPLDESTHENMERKISKKKMNKGWVGRGSSNLNSSSHLEFDSFYQIIDDDEGVHSFGEPRPREHPQEEELQKFKKEFEAYQAARFEEWPKAVDIISGSMRNLSQEENLSKENMQHIASSKTDSHSFKTKLPNGDLMESILSKKKESFPSRSKTKSRDFEESLMMKSRSRLLDICASPTQIVILKPGSERICNCNHEENCISLSGTLHGGKGIEDFLEEVRERLKCELQGIRGSGIESSFNDKLSDAKVVRERTTRDAEPNLLRSESTRSYKSKMQLNGPSSPEFFNIDTRRFLSERLRNTVKNELNLDIPEVACYLDNGKVRLKQDTVKGANDKSQWGVLKEKKELQSCSYRHKLDDNVLFHKELSPRNLERSLSAPASGTSFGRLLLEDRHILTGALIQRKLETVEARPVGVKKQKKDGFNIKEKLSNFKYTLGLRGKLFGRRVQSKVESHGSECGSILRDVRSGPTILMKCGDKHENSTEVPPSPASVCSCADEEHWRQIGYSSLTSTPDASSLDDIFVPKVFRDISSGLNELKRQLGQLDSDGFDDFTTKQEPTESELVELDDPAESYVRDLLVASGMYFGSWDKYIGNSVFEEVEESHRKLVKEDERSTKDDNKNKVEHKVLLDLLNEALSIVLGPPLTLSRFRRKLSNSSLQPPPCGKELLKLVWDIVRVSLHPTSNTSLYSLDSFVAQDLGSNSWSWLTNDEIDTLERETACTIADDLVEEFTKDMLS* 849
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g2781 848 MobiDBLite consensus disorder prediction 368 391 - -
Pvu3g2781 848 Pfam Domain of unknown function (DUF4378) 684 841 IPR025486 -
Pvu3g2781 848 PANTHER RB1-INDUCIBLE COILED-COIL PROTEIN 1 847 - -
Pvu3g2781 848 Pfam DUF761-associated sequence motif 92 106 IPR032795 -
Pvu3g2781 848 MobiDBLite consensus disorder prediction 377 391 - -
Pvu3g2781 848 PANTHER RB1-INDUCIBLE COILED-COIL PROTEIN 1 847 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g2781 Pvu-Chr3 49623306 49628520 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g2781 74 846 TRM (TON1 Recruiting Motif) Superfamily AT2G17550 36.609 5.84e-125 390
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g2781 - - gmx:100810825 1332.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g2781 3 49623306 49628520 Pvu3g2781 3 49623306 49628520 ECH
Pvu2g1206 2 23689126 23694996 Pvu3g2781 3 49623306 49628520 PCT