Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g2775 ATGGGTCTCTGCTTCTCCTCCTCTTCCTCCCCTTCCCCCAACCCTCCTAACTACTCAGGTTCAACCAGTAACGTGGGGTTCTCCGCCACCACCAGCAGCTTCGGGAAGAGCCAATTCTCGGAGATGGCCAGTGGGAGCATCGACGGCGAAGGCTCTCTTCCATTTTGTTCCCCTGACGGCCAGATTCTGGAACGGCCCAACTTGAAGGAGTTCAGTTTCGTGGACCTGAAATCCGCCGCCAAGAGTTTCAAAGGGGACACATTGCTGGGTGAAGGTGGCTTTGGCAGAGTCTACAAGGGTTGGTTGGACGAGAAGACCCTCGCCCCTGCCAAACCAGGCTTTGGCATGGTCGTCGCCATCAAAAAATTGAACCCCGAAAGCACGCAAGGCTTTCAAGAATGGAAGTCAGAAGTGAACTTCTTAGGAAGGCTTTCACACCCCAACCTGGTCAAGTTATTGGGCTACTGTTGGGACGAGGATGAACTTCTTCTTGTGTACGAGTTCATGCCTAAGGGAAGCTTGGAGAATCATCTATTTAGAAGAAATCCTAACATAGAACCACTTTCTTGGAACACTCGGCTTAAAATAGCTATTGGTGCTGCTCGTGGACTAGCTTTCCTGCACGCCTCCGAAAAGCAAGTCATATACAGAGATTTCAAGGCCTCAAATATACTCCTCGATGGGAATTACAATGCTAAAATATCAGATTTTGGCTTGGCTAAATTGGGACCATCTGGGGGACAATCACATGTAACTACGAGGGTCATGGGCACCTACGGTTATGCTGCTCCAGAATATATCGCAACAGGTCACTTGTATGTGAAGAGTGATGTGTATGGATTTGGTGTAGTTCTTCTTGAAATACTGACAGGCATGAGGGCATTTGACACAAGAAGGCCAACAGGGCAGCAGAATCTGGTTGAGTGGACCAAACCTTTTCTCTCTTCAAAAAAAAAGTTGAAAACCATTATGGATATTAGGATAAAGGGTCAATATTCATCCAAGGCTGCATCACAAGCAGCAGAACTTATTCTAAAATGCCTAGAGCATGACCCTAAACAACGTTCTTCAATGAAAGAAGTACTTGAGGGATTGGAAGCCATTGAAACCATCCATGAAAAATCCAAGGAATCCAAAACCCGCAATTCTCACAACATTTCTCATCAACATCTCCGGCAGAGAGCTGTGAAGGTATAA 1197 0.4678 MGLCFSSSSSPSPNPPNYSGSTSNVGFSATTSSFGKSQFSEMASGSIDGEGSLPFCSPDGQILERPNLKEFSFVDLKSAAKSFKGDTLLGEGGFGRVYKGWLDEKTLAPAKPGFGMVVAIKKLNPESTQGFQEWKSEVNFLGRLSHPNLVKLLGYCWDEDELLLVYEFMPKGSLENHLFRRNPNIEPLSWNTRLKIAIGAARGLAFLHASEKQVIYRDFKASNILLDGNYNAKISDFGLAKLGPSGGQSHVTTRVMGTYGYAAPEYIATGHLYVKSDVYGFGVVLLEILTGMRAFDTRRPTGQQNLVEWTKPFLSSKKKLKTIMDIRIKGQYSSKAASQAAELILKCLEHDPKQRSSMKEVLEGLEAIETIHEKSKESKTRNSHNISHQHLRQRAVKV* 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g2775 398 PANTHER SERINE/THREONINE-KINASE CX32, RELATED PROTEIN 18 379 - -
Pvu3g2775 398 Gene3D Transferase(Phosphotransferase) domain 1 169 394 - -
Pvu3g2775 398 CDD STKc_IRAK 89 368 - -
Pvu3g2775 398 SUPERFAMILY Protein kinase-like (PK-like) 62 366 IPR011009 -
Pvu3g2775 398 PANTHER OS01G0588500 PROTEIN-RELATED 18 379 - -
Pvu3g2775 398 Pfam Protein tyrosine and serine/threonine kinase 87 364 IPR001245 GO:0004672|GO:0006468
Pvu3g2775 398 ProSiteProfiles Protein kinase domain profile. 83 368 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu3g2775 398 ProSitePatterns Protein kinases ATP-binding region signature. 89 122 IPR017441 GO:0005524
Pvu3g2775 398 ProSitePatterns Serine/Threonine protein kinases active-site signature. 214 226 IPR008271 GO:0004672|GO:0006468
Pvu3g2775 398 MobiDBLite consensus disorder prediction 1 21 - -
Pvu3g2775 398 MobiDBLite consensus disorder prediction 374 398 - -
Pvu3g2775 398 Gene3D Phosphorylase Kinase; domain 1 67 168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g2775 Pvu-Chr3 49575504 49580097 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g2775 59 365 Glycoside Hydrolase AT3G07070 50.000 4.20e-102 307
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Pvu3g2775 Pkinase 3.9e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g2775 - - gmx:100794193 663.685
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g1197 2 23541887 23545027 Pvu3g2775 3 49575504 49580097 PCT