Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g2770 ATGGCATCCTCAACTTCTTGTGATGTTAGTGAAATAAAGCATGATGTGTTCATCAGCTTTAGAGGCACAGACGTCAGAAGAGGTCTTCTTAGCCATTTGAAAAGAGAATTAGATCGCAAGAACATTGATGCCTATGTGGATGAGAGACTTGATAAAGGAGGTGAAATATCATCCAAACTTCTCAGAGCCATTGAAGGGTCACAAGTTTTATTGGTCGTATTCTCCAAAGACTATGCTTCATCACAGTGGTGTTTGAAGGAGCTTGCCAAAATGGTTGAATGCATGGAAACAAGTAAACAGATTGTTCTACCTGTTTTCTTTAATGTAGATCCATCAGACGTGCGACACCAAAATGGAGATTATGGAGATGCTTTAGCTAAACATGAAGAAAAGTTCAAGGGAAACATGCTCAAGGTACAAAGTTGGAGATCAGCTTTGAAAAAAGCTGGTAGTTTATCCGGATTTCATTATCCAACCAATTATAGGAATGAATCTGATCTTGTCTATGAAATTGTGGAATACATCTCAGCAAAATTGAGCAAGCTCTACCCAAGTGAATCAAATGGTCTTGTTGGATTTGATCAAAACATTACACAGATTCAGTCCTCATTGCGAATGGAATCGAATGAAGTTGTTTTTGTTGGAATCTGGGGCATGGGTGGCATAGGTAAGACAACCATTGCTCGTGCTATATTTGATAAATGTTCTCTTCAGTATGATGGCTGTTGCTTCTTCAATGTAAGAGAAGAATTGCAACAGCATGGATCCAGCAATTTACGAGAGAGGTTTATATATGAACTATTTGAGGGAGAAGGTCTCCGCACAAGCAAAGCAAGATTCTTCAATTCTGCTCTAAGAAGAATGGGTCGGAAAAAAGTTATGGTTGTGCTTGATGATGTCAATACTTCTGAAGAATTAAAGGATCTGGTCACAAAACCAATTTGCTTTGGTGCAGGGAGTAGAGTGATAGTAACAAGTAGAGATCAGGACGTGCTTACAAGTGGAGGAATTCATCAAATTCATGAGGTCAAGGAAATGGACCCTAGAGATTCTCTCAAGCTCTTCTGTTTGAATGCCTTCAATGAAAGCCAACCCAAAACAGGATATGAAAAACTAACTGAAGAGGTGCTTGAAATCGCCCAGGGAAACCCATTAGCCTTGAAAGTTTTAGGTGCACATTTCCATTCCAGAAGTTCTATAAACACATGGAAGTGTTCATTAAGCAAATTCAAGAAGTATCCCAATGAGAAAATTCAAAGTGTGTTAAGATTCAGCTATGATGGACTGCATGTAGTAGAGAAAAAGGCCTTCCTAGATATTGCATTCTTTTTCGAAGAAGACAGCAAAGACTATGTTATAAAGCAACTAGACGCATGGGGACTTTATGGAGCTAGTGGAGTGGAGGTTCTTCAACGAAAGGCTCTTATAACAGTTTCAAGTGACAATAGAATACAAATGCATGACCTGATACGACAAATGGGTTGCGAAATAGTTCGTCAAGAATGTATTATATATCCAGGAAGACGCACCCGATTGAGGGATAAAGAGGAAGTATACAATGTATTGAGATATAAGCTGGGAAGTGACAAGGTGGAGGCCATGCAAGTAGATCTACTGTCTCGAATTAAAGATTTACCTCTGAAACTAGGCACTTTTAAGAAGATGCCTAGGCTGAGATTTCTCAAATTTTATCTCCCATATGCTGATATTTTCCTGCCGCCAAACCAGGATGGAAATTTATGGTTTGGACAACATGAATTTCCGTTGCTTTTATCTGCATGTTGCGAAGAACTCATGAAAGTAGCATGTGAGATTCACATAAAATGTGTTGACTACCTTTATATTGATGGTTGCTCACATCCTTCACGACTGAACAAATCTTCAGTAACATCACCGTTAGGAAGCCGTGGAATGGAACCAATGTCGTTGCTATTGATGTTATGGAAGGAACCTCTCAGTTCCCTCAGGAATCTTGAATGCTCAGATATGCTTGATCAACAATGGAAGACTCTGTCTGATGAGCTACTTTGCTTGAGATCTACTTATTATCTTAAGCTTTCTAAGAAGAGCACGGGACAAGACAGTGGAAAACCCAAGTTGCACATTCTGTTTGACGGCTTAAGGTTTTATGAACGAATATCTGTGAGCCAGTTGGAAAACTCAAATGTTGGGCAATATCGGGTGTGGTTTCTTTTTTGTGCAGGTTTTAACTTTCTATTGTATCTCTTTCTTAGGAGACCCTGGTTTCAATTCCTCTTTTCCTTTCCCTTCCAATTCTTTTGCACTTTCTTTTTGTATCTTTTTTCTCATTTTACTTCCCTGTTCTATCCACCCCTTGCATTTTCCTTATCATGGGTACGGGCTTTCTTTCTACTCCTGTTCTTTTACATTTTGGGTAAACTATGTTCTTGGTTTCTCAGGGTTGGTTGA 2430 0.3918 MASSTSCDVSEIKHDVFISFRGTDVRRGLLSHLKRELDRKNIDAYVDERLDKGGEISSKLLRAIEGSQVLLVVFSKDYASSQWCLKELAKMVECMETSKQIVLPVFFNVDPSDVRHQNGDYGDALAKHEEKFKGNMLKVQSWRSALKKAGSLSGFHYPTNYRNESDLVYEIVEYISAKLSKLYPSESNGLVGFDQNITQIQSSLRMESNEVVFVGIWGMGGIGKTTIARAIFDKCSLQYDGCCFFNVREELQQHGSSNLRERFIYELFEGEGLRTSKARFFNSALRRMGRKKVMVVLDDVNTSEELKDLVTKPICFGAGSRVIVTSRDQDVLTSGGIHQIHEVKEMDPRDSLKLFCLNAFNESQPKTGYEKLTEEVLEIAQGNPLALKVLGAHFHSRSSINTWKCSLSKFKKYPNEKIQSVLRFSYDGLHVVEKKAFLDIAFFFEEDSKDYVIKQLDAWGLYGASGVEVLQRKALITVSSDNRIQMHDLIRQMGCEIVRQECIIYPGRRTRLRDKEEVYNVLRYKLGSDKVEAMQVDLLSRIKDLPLKLGTFKKMPRLRFLKFYLPYADIFLPPNQDGNLWFGQHEFPLLLSACCEELMKVACEIHIKCVDYLYIDGCSHPSRLNKSSVTSPLGSRGMEPMSLLLMLWKEPLSSLRNLECSDMLDQQWKTLSDELLCLRSTYYLKLSKKSTGQDSGKPKLHILFDGLRFYERISVSQLENSNVGQYRVWFLFCAGFNFLLYLFLRRPWFQFLFSFPFQFFCTFFLYLFSHFTSLFYPPLAFSLSWVRAFFLLLFFYILGKLCSWFLRVG* 810
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g2770 809 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 9 567 - -
Pvu3g2770 809 Pfam TIR domain 13 188 IPR000157 GO:0007165
Pvu3g2770 809 PRINTS Disease resistance protein signature 213 228 - -
Pvu3g2770 809 PRINTS Disease resistance protein signature 287 301 - -
Pvu3g2770 809 PRINTS Disease resistance protein signature 380 394 - -
Pvu3g2770 809 SMART till_3 13 152 IPR000157 GO:0007165
Pvu3g2770 809 SUPERFAMILY "Winged helix" DNA-binding domain 417 505 IPR036390 -
Pvu3g2770 809 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 179 440 IPR027417 -
Pvu3g2770 809 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 9 567 IPR044974 GO:0006952
Pvu3g2770 809 Gene3D - 180 337 IPR027417 -
Pvu3g2770 809 Gene3D - 8 179 IPR035897 -
Pvu3g2770 809 Pfam NB-ARC domain 195 425 IPR002182 GO:0043531
Pvu3g2770 809 SUPERFAMILY Toll/Interleukin receptor TIR domain 4 155 IPR035897 -
Pvu3g2770 809 Gene3D - 346 430 IPR042197 -
Pvu3g2770 809 ProSiteProfiles TIR domain profile. 12 179 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g2770 Pvu-Chr3 49531807 49535109 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g2770 14 569 WRKY Transcription Factor Family AT4G12020 31.250 2.24e-59 218
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g2770 - - gsj:114380997 1036.17