Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g2769 ATGTCAATCTCAACTTCACCTCACTCACACCTTCTTCACCCAAACCATAACCACTTTCTCTCCAACCACCGTATCCACACCACCACCACCACCATTTCCCTCCCCTCTTCGCGCACTTTCAGGCCCATCAAATGCGCTTCCACCTCGGTGCAGCTCCAGGACCCCCTCCCGGTCCAGGTCCAGGCCCAGGCCCAGGCCCAAGAGCGCGTCTTCAACTTCGCCGCCGGTCCCGCCACCCTGCCCGAGAACGTAATTCGCCGCGCCCAGTCTGAGCTCTACCTCTGGCGCGAATCCGGCATGGGCGTCATGGAGATGAGCCACCGTAGCAAGGATTTCATGTCCATCATGGAAGCTGCCGAGGAGAATCTATGCTCCCTCCTGGAAATCCCGCCGGGATATTCCGTGTTGTTCCTCCAGGGCGGCGCCAGCACCCAGTTCGCTGCCCTGCCGCTGAACCTCTGCGCCCCTGACGACCCCGCGGATTACATCGTGACCGGCTCGTGGGGCGACACGGCATTCAAGGAGGCCCAAAAATACTGCAGGGCCAGTGCGATTTGGTCTGGGAAATCTGAAAAGTACACAAAGATCCCATCTTTTGGGAGTTTGGACCAGAACCCAGCTGCCAAATATTTGCACATATGTGCAAATGAGACTATTCATGGGGTTGAGTACAAGAACTACCCGATTCCAACGAACCGCAGTGGTCTTCTTGTTGCTGATATGTCTTCAAATTTCTGTTCCAAGCCTGTTGATGTGTCACAGTTTGGTGTCATCTATGCTGGTGCACAGAAGAACGTGGGGCCCTCTGGTGTCACAATTGTGATAGTGAGGGATGATCTGGTGGGGCGTGCGCAGGGTTTTACTCCTGTGATGCTTGACTATAAGATTCATGCTGAGAACATGTCTCTGTACAACACTCCTCCTTGCTATGGCATTTACATGTGCGGGTTGGTGTTTCAGGACCTGCTGGAGCAGGGTGGGTTGGCGGAGGTTGAGAAGAAGAATGTGAAGAAAGCTGAGATTTTGTATGATGCAATTGATGGGAGCAAGGGATATTACAAGTGTCCGGTGGAGAAGTCTGTGAGGTCACTGATGAATGTGCCCTTCACGTTGGAGAAGTCAGAGCTGGAGGGTGAGTTCATCAAGGAGGCTGCAAAGGAGAACATGGTTCAGCTCAAAGGACATAGGTCTGTTGGTGGCATCAGGGCTTCCATTTACAATGCTATGCCTTTGGCTGGAGTTCAGAAGTTGGTCGCTTTCATGAAGGACTTCCAAGCCAGGCATGCTTAG 1290 0.5333 MSISTSPHSHLLHPNHNHFLSNHRIHTTTTTISLPSSRTFRPIKCASTSVQLQDPLPVQVQAQAQAQERVFNFAAGPATLPENVIRRAQSELYLWRESGMGVMEMSHRSKDFMSIMEAAEENLCSLLEIPPGYSVLFLQGGASTQFAALPLNLCAPDDPADYIVTGSWGDTAFKEAQKYCRASAIWSGKSEKYTKIPSFGSLDQNPAAKYLHICANETIHGVEYKNYPIPTNRSGLLVADMSSNFCSKPVDVSQFGVIYAGAQKNVGPSGVTIVIVRDDLVGRAQGFTPVMLDYKIHAENMSLYNTPPCYGIYMCGLVFQDLLEQGGLAEVEKKNVKKAEILYDAIDGSKGYYKCPVEKSVRSLMNVPFTLEKSELEGEFIKEAAKENMVQLKGHRSVGGIRASIYNAMPLAGVQKLVAFMKDFQARHA* 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g2769 429 Gene3D Aspartate Aminotransferase, domain 1 325 429 IPR015422 GO:0003824
Pvu3g2769 429 PANTHER PHOSPHOSERINE AMINOTRANSFERASE 1, CHLOROPLASTIC 27 429 - -
Pvu3g2769 429 Gene3D - 82 324 IPR015421 GO:0003824
Pvu3g2769 429 Pfam Aminotransferase class-V 70 417 IPR000192 -
Pvu3g2769 429 PANTHER PHOSPHOSERINE AMINOTRANSFERASE 27 429 IPR022278 GO:0004648|GO:0006564
Pvu3g2769 429 TIGRFAM serC_1: phosphoserine transaminase 70 428 IPR022278 GO:0004648|GO:0006564
Pvu3g2769 429 CDD PSAT_like 71 425 IPR022278 GO:0004648|GO:0006564
Pvu3g2769 429 SUPERFAMILY PLP-dependent transferases 68 426 IPR015424 -
Pvu3g2769 429 Hamap Phosphoserine aminotransferase [serC]. 68 428 IPR022278 GO:0004648|GO:0006564
Pvu3g2769 429 ProSitePatterns Aminotransferases class-V pyridoxal-phosphate attachment site. 255 274 IPR020578 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g2769 Pvu-Chr3 49528486 49529775 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g2769 K00831 - gmx:100795286 643.654
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g2769 3 49528486 49529775 Pvu2g1188 2 23365486 23367256 PCT