Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g2753 ATGGGTGTCTCGCAAAAATGGTTCAGAGTTTTTGGGGGCAGATTCTTCAGATCATCCAACAAAGACACCATTCTCCTCCCCACAACTAACCAATGCGAAGAAGCCATACTTAGGAATGAAGACTTCACTTTCCCTACACCAACACCAACACCTATCTCTTCAATCACCATGGAAAATCTTGCGGCCATTAAGATCCAAGCTTATTTCAGGGGACATCTGGCGAGAAGAGCATATAAGGCGTTGAAAGGGCTGGTGAAGGTGCAAGCTTTGGTTCGTGGGGTGTGGGTGAGGAAACAATCACGTATTGCAATGCAGTGTATGCACGCACTTGTACGATTACAAGTCAGGGTTCGTTCAAGGCAGCTACTTGCTACCTTTCATACACAACCAAACACTAACTGA 402 0.4577 MGVSQKWFRVFGGRFFRSSNKDTILLPTTNQCEEAILRNEDFTFPTPTPTPISSITMENLAAIKIQAYFRGHLARRAYKALKGLVKVQALVRGVWVRKQSRIAMQCMHALVRLQVRVRSRQLLATFHTQPNTN* 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g2753 133 ProSiteProfiles IQ motif profile. 58 86 IPR000048 GO:0005515
Pvu3g2753 133 ProSiteProfiles IQ motif profile. 82 109 IPR000048 GO:0005515
Pvu3g2753 133 PANTHER OS04G0561100 PROTEIN 48 124 - -
Pvu3g2753 133 SMART iq_5 57 79 IPR000048 GO:0005515
Pvu3g2753 133 PANTHER IQ-DOMAIN 5-RELATED 48 124 - -
Pvu3g2753 133 Gene3D - 58 109 - -
Pvu3g2753 133 Pfam IQ calmodulin-binding motif 85 99 IPR000048 GO:0005515
Pvu3g2753 133 Pfam IQ calmodulin-binding motif 61 79 IPR000048 GO:0005515
Pvu3g2753 133 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 58 102 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g2753 Pvu-Chr3 49410924 49412391 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g2753 56 124 IQD Protein Family AT3G51380 73.913 3.68e-32 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g2753 - - vun:114179724 172.94