Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g2751 ATGAGTAGGGTTGAAGGAAATGAATGGGAGAGTGCATTGAATGATGAACTCTTCAACATTAACTTTGAGGATATTTTTGGGGTCTCCATTGATCAAATGCTTGGCGATGTCAACTACCCAGAAGAAACCAGCAACTTACAGGGCCAACCATTGTCTCAACAGAGCTTTTCTGATCATCCTCTCACACAACTCAATGAAAGCGTCACTCACGTTGAATCGGGTCCGACCCAGTTACCCGATAACCCGCCAAACTCCGAGCACCAGAACGGTGGTTGCGGACCGAGTCGACAGCGCCAGCCAAGGAAGACATGGAGCATTGAAGAGCACAAATTGTTTCTTCTTGGGCTTCGCATGTATGGCGGAAGTTGGAAAAAGATTTCTGAAAACGTTGTTCGAACCAAAACACCATCGCAACTAGCAAGTCACGCTCAGAAATACTTCATACGTCAGAAAATGGAGCCATCACAGAGGAAAAGAAAAAGCATTCATGATATAACTCTTGAACTG 507 0.4517 MSRVEGNEWESALNDELFNINFEDIFGVSIDQMLGDVNYPEETSNLQGQPLSQQSFSDHPLTQLNESVTHVESGPTQLPDNPPNSEHQNGGCGPSRQRQPRKTWSIEEHKLFLLGLRMYGGSWKKISENVVRTKTPSQLASHAQKYFIRQKMEPSQRKRKSIHDITLEL 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g2751 169 Pfam Myb-like DNA-binding domain 101 147 IPR001005 -
Pvu3g2751 169 Gene3D - 102 152 - -
Pvu3g2751 169 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 96 151 IPR017930 -
Pvu3g2751 169 PANTHER TRANSCRIPTION FACTOR SRM1 55 167 - -
Pvu3g2751 169 MobiDBLite consensus disorder prediction 41 100 - -
Pvu3g2751 169 PANTHER TRANSCRIPTION FACTOR KUA1 55 167 - -
Pvu3g2751 169 ProSiteProfiles Myb-like domain profile. 96 147 IPR001005 -
Pvu3g2751 169 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 100 150 IPR006447 GO:0003677
Pvu3g2751 169 ProSiteProfiles SANT domain profile. 99 151 IPR017884 -
Pvu3g2751 169 SMART sant 100 149 IPR001005 -
Pvu3g2751 169 CDD SANT 103 147 IPR001005 -
Pvu3g2751 169 MobiDBLite consensus disorder prediction 41 101 - -
Pvu3g2751 169 SUPERFAMILY Homeodomain-like 97 151 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g2751 Pvu-Chr3 49387909 49388512 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Pvu3g2751 Myb_DNA-binding 1.7e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g2751 - - pvu:PHAVU_003G267300g 350.132