Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g2719 ATGGGTTCTATTGGAATCAAAAGCTCGGGATCCGAGGTTGTCACCATTGATGTTCATGCAACCAAGGGTTTGATCCAGACCAGCCATGTTTATCTCGATGTCAGGACTGTGGAAGAGTTTGAGAAAGGGCATGTGGATGCTGAGAAGATCATTAACATTCCGTACATGTTTAATACACCAGAAGGTAGGGTGAAGAACCTGGAGTTTCTGAAGGAGGTTCTATCAGCTTGCAAGAAAGAAGATCACATCATAGTGGGTTGTCAAAGTGGAGTGAGATCTGTGTATGCAACTAGTGATCTTCTGAAGGAAGGCTTCAAGGATGTGAGCAACATGGGAGGAGGATATCTTGACTGGGTTAAAAATCAATTTCCAGTGAAAACACCTTTGGATTTGGTTAAAGATGAAGTTCCATTGAAAGCAACTTTGGACTTGGTTAAAGATGAAGTTCCATTGGAAACAACTTTGGACTTGGTTAAAGATGAAGAAGTTCCATTGGAAACAACTTTGGACTTGGTTAAAAACAAATTGCCATTAAAAGCACCATAA 546 0.4066 MGSIGIKSSGSEVVTIDVHATKGLIQTSHVYLDVRTVEEFEKGHVDAEKIINIPYMFNTPEGRVKNLEFLKEVLSACKKEDHIIVGCQSGVRSVYATSDLLKEGFKDVSNMGGGYLDWVKNQFPVKTPLDLVKDEVPLKATLDLVKDEVPLETTLDLVKDEEVPLETTLDLVKNKLPLKAP* 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g2719 181 CDD RHOD 30 119 - -
Pvu3g2719 181 Gene3D - 6 127 IPR036873 -
Pvu3g2719 181 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 12 125 IPR036873 -
Pvu3g2719 181 PANTHER THIOSULFATE SULFURTRANSFERASE 18 8 128 - -
Pvu3g2719 181 ProSiteProfiles Rhodanese domain profile. 29 127 IPR001763 -
Pvu3g2719 181 PANTHER THIOSULFATE SULFURTRANSFERASE 18 8 128 IPR044684 GO:0003824
Pvu3g2719 181 Pfam Rhodanese-like domain 30 120 IPR001763 -
Pvu3g2719 181 SMART rhod_4 16 124 IPR001763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g2719 Pvu-Chr3 49145190 49147687 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g2719 3 127 Sulfurtransferasese or Rhodanese AT5G66170 55.200 2.67e-49 154
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g2719 - K15692 pvu:PHAVU_003G264200g 361.303
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g2719 3 49145190 49147687 Pvu3g2719 3 49145190 49147687 ECH
Pvu2g1112 2 21777622 21778893 Pvu3g2719 3 49145190 49147687 PCT
Pvu2g1163 2 22944170 22946668 Pvu3g2719 3 49145190 49147687 PCT