Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g2694 ATGGGAATTTGCTATTCCGCCACCAAGGTCAGCGTCTTCAACGGCTCCCCCGTCACCGTCAAGAAAAACCGCAAGCGCGCCGCGGCACCCGAAAAGAGGACGCCGACGGCCAATACCGAACGGCACAAGGCAAGTTCGCGGCACGTGCCGTGCGGGAAACGCACGGATTTTGGTTACGAGAAGCATTTCGATACGCGGTACACGCTGGGCAAATTGCTGGGACACGGCCAATTCGGTTACACCTACGTAGGAATCGACAAAGCTAATGGCGATCGCGTCGCCGTTAAGAGGCTCGAGAAGAGTAAGATGGTTCAGCCTATTGCCGTTGAGGATGTTAAGCGAGAGGTCAAGATATTGAAAGCGCTCACTGGCCACGAGAATGTGGTTCAGTTCTATGATGCGTTTGAAGATGATTCTTACGTGTACATAGTTATGGAGTTATGCGAGGGTGGAGAACTGCTTGATCGGATATTGGCCAAGAAAGAGAGTCGTTATACCGAAAAAGATGCAGCGGTGGTTGTAAGGCAGATGCTCAAGGTTGCAGCTGAGTGCCATTTACATGGTTTGGTGCACCGAGACATGAAACCAGAAAATTTTCTTCTTAAATCCACTAAAGAAGATTCACCTTTAAAGGCCACAGATTTTGGTTTGTCGGATTTCATTAAACCTGGAAAGAAGTTTCATGATATTGTTGGTAGTGCTTACTATGTTGCACCTGAAGTATTAAAACGCAAGTCTGGCCCACAATCAGATGTGTGGAGTATTGGTGTTATTACATACATATTGCTGAGTGGGAGACGCCCATTTTGGGATAAGACTGAGGATGGTATTTTTAAGGAGGTTTTACGGAAAAAGCCTGATTTCCATCGGAAACCATGGACAACTATAAGTAATGCTGCAATAGATTTTGTGAAAAAATTACTGGTAAAGGATCCTAGGGCAAGGCTAACTGCTGCTCAAGCTCTATCACATCCATGGGTTAGAGAAGGAGGAGAAGCATCGGAGATTCCTATTGATATATCCGTTCTTAGCAACATGCGGCAATTTGTGAAATATAGTCGATTGAAACAATTTGCACTCAGGGCATTGGCTAGCACACTTAACGAAGAAGAGTTGGCTGATCTAAAAGATCAATTTGATGCTATAGATGTGGACAAAAATGGTTCTATTAGTTTGGAAGAGATGAGACAGGCTCTTGCGAAAGATCTTCCTTGGAAGTTGAAAGAACCACGAGTACTAGAGATATTGCAAGCGATAGACAGCAACACTGATGGGCTAGTGGATTTTAGTGAGTTTGTAGCTGCTACATTACATGTGCATCAGTTGGAGGACGACTCTGATAAGTGGCAGCTACGGTCACAAGCTGCTTTTGAGAAATTTGACATAGATAAAGATGGCTATATTAGTCCAGAGGAACTTAAAATGCATACAGGCTTGAGAGGCTCCATTGATCCTTTGCTGGAGGAAGCTGATATTGACAAAGACGGAAAAATCAGCCTATCAGAGTTCCGTAGACTTCTAAGGACTGCGAGCATGAGTTCTCAAAAGGTTTCAAGCCCAACTGTCTATAAGCGGAGAATCTAG 1584 0.4476 MGICYSATKVSVFNGSPVTVKKNRKRAAAPEKRTPTANTERHKASSRHVPCGKRTDFGYEKHFDTRYTLGKLLGHGQFGYTYVGIDKANGDRVAVKRLEKSKMVQPIAVEDVKREVKILKALTGHENVVQFYDAFEDDSYVYIVMELCEGGELLDRILAKKESRYTEKDAAVVVRQMLKVAAECHLHGLVHRDMKPENFLLKSTKEDSPLKATDFGLSDFIKPGKKFHDIVGSAYYVAPEVLKRKSGPQSDVWSIGVITYILLSGRRPFWDKTEDGIFKEVLRKKPDFHRKPWTTISNAAIDFVKKLLVKDPRARLTAAQALSHPWVREGGEASEIPIDISVLSNMRQFVKYSRLKQFALRALASTLNEEELADLKDQFDAIDVDKNGSISLEEMRQALAKDLPWKLKEPRVLEILQAIDSNTDGLVDFSEFVAATLHVHQLEDDSDKWQLRSQAAFEKFDIDKDGYISPEELKMHTGLRGSIDPLLEEADIDKDGKISLSEFRRLLRTASMSSQKVSSPTVYKRRI* 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g2694 527 ProSitePatterns Protein kinases ATP-binding region signature. 73 96 IPR017441 GO:0005524
Pvu3g2694 527 ProSiteProfiles Protein kinase domain profile. 67 327 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu3g2694 527 MobiDBLite consensus disorder prediction 21 49 - -
Pvu3g2694 527 CDD EFh 454 508 IPR002048 GO:0005509
Pvu3g2694 527 Gene3D - 349 506 - -
Pvu3g2694 527 ProSiteProfiles EF-hand calcium-binding domain profile. 486 513 IPR002048 GO:0005509
Pvu3g2694 527 ProSitePatterns EF-hand calcium-binding domain. 491 503 IPR018247 -
Pvu3g2694 527 Gene3D - 368 437 - -
Pvu3g2694 527 CDD EFh 374 435 IPR002048 GO:0005509
Pvu3g2694 527 MobiDBLite consensus disorder prediction 29 49 - -
Pvu3g2694 527 Gene3D Transferase(Phosphotransferase) domain 1 153 348 - -
Pvu3g2694 527 ProSiteProfiles EF-hand calcium-binding domain profile. 370 405 IPR002048 GO:0005509
Pvu3g2694 527 Pfam Protein kinase domain 67 327 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu3g2694 527 ProSiteProfiles EF-hand calcium-binding domain profile. 448 483 IPR002048 GO:0005509
Pvu3g2694 527 Gene3D Phosphorylase Kinase; domain 1 60 152 - -
Pvu3g2694 527 SUPERFAMILY EF-hand 352 509 IPR011992 -
Pvu3g2694 527 Pfam EF-hand domain pair 374 436 IPR002048 GO:0005509
Pvu3g2694 527 Pfam EF-hand domain pair 455 507 IPR002048 GO:0005509
Pvu3g2694 527 SMART serkin_6 67 327 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu3g2694 527 SMART efh_1 374 402 IPR002048 GO:0005509
Pvu3g2694 527 SMART efh_1 482 510 IPR002048 GO:0005509
Pvu3g2694 527 SMART efh_1 452 480 IPR002048 GO:0005509
Pvu3g2694 527 SMART efh_1 411 439 IPR002048 GO:0005509
Pvu3g2694 527 ProSitePatterns EF-hand calcium-binding domain. 461 473 IPR018247 -
Pvu3g2694 527 CDD STKc_CAMK 66 326 - -
Pvu3g2694 527 ProSitePatterns Serine/Threonine protein kinases active-site signature. 189 201 IPR008271 GO:0004672|GO:0006468
Pvu3g2694 527 PANTHER SERINE/THREONINE-PROTEIN KINASE 37 517 - -
Pvu3g2694 527 ProSitePatterns EF-hand calcium-binding domain. 420 432 IPR018247 -
Pvu3g2694 527 PANTHER CALCIUM-DEPENDENT PROTEIN KINASE 28-LIKE 37 517 - -
Pvu3g2694 527 ProSitePatterns EF-hand calcium-binding domain. 383 395 IPR018247 -
Pvu3g2694 527 SUPERFAMILY Protein kinase-like (PK-like) 65 341 IPR011009 -
Pvu3g2694 527 ProSiteProfiles EF-hand calcium-binding domain profile. 407 442 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g2694 Pvu-Chr3 48961700 48972324 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g2694 1 523 EF-hand Containing Proteins AT2G17890 75.044 0.0 838
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Pvu3g2694 Pkinase 3.2e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g2694 K13412 - gmx:100798941 947.192
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g1122 2 21995153 22001011 Pvu3g2694 3 48961700 48972324 PCT