Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g2692 ATGGAGGCTGAGGCGCAAATCTCTCACAATTCAAGTACTCAATTTCAGCCAGAGCCTGTTGTCTCAGTTCAAAATGGGGATCCTGGTGTTTCCTCATATGTGGCAAATGCTGTTATCCCTCAGCAGCCAGCTACAAAAAAACCGACCAGACAGTGGGCTGCGTGGACTCGACAAGAGGAGGAGAGTTTCTTCACTGCATTACGACAAGTTGGGAAGAATTTTGAGAAAATCACTTCCCGTGTACAAAGTAAAAACAAGGATCAGGTCAGGCATTATTACTACCGGCTTGTGAGGCGGATGAACAAACTTCTTGGTCCAGGACTATGTTTGGATGCCAAAAACTCTAAAGATACTAATGCTGCAATGCTTCGCTGGTGGTCTTTATTGGAAAAGTATAGCTGCAAAGCCTCAAAGCTTCACCTGAAGCCTCGGAGATTTAAAATATTTTTAGAAGCCTTGGAGCACCAACTATTGAAGGACCGAAAGAAGAATGTAAGGAAGCGACCCTTGCAGGGGGGGAATTGTCTTCCTCCTCTGCCTAGTACAGTCTCAAATCAAAGTAGAGCATCAGGAAATGAGGCCCGTGCAGTTAAACTTGTTCTTGTTGACAGTCAAAATATTCTTAAATTGGGACCTTCAAAATCATCAATGAAGCGCAATATAAACATGGGTGTTAGCCGTAGTAACACAAAAGGAGATTCAAATGCCATCAAATCAACAAGGCAACGAAAGAAATCTGGTATGATTTCAACAGCTGCATATAAAAAATGGGAGAAGGCTGCAATTGCTGGTGTTTCTTTAGTTGCAGATGCTGCAGAGCATTTGGAGCGAGCTGCAACTGTTAGAGAGATTGAACAAGATCAGGAGAATCCAGGAGAAAAGTGTTTTGATCCAACCGATTATGTCCTGCCCTCTTTACCCACATGTCCACAAAATCAATTTGTTGATAACAATGTGAATAATATGAAACTTAAGCTCCAGTTATTCCCAATCGACGAACCTACTCGAAGAGCATTGGAAGTGGATAAGCATAATCCACACCTGGAGCTTACACTTAGTACTCGAAAGAAGATATCATCAATTTTGGAACATCTAAACCGTAAATGGGGTCATTCAAGCATAGCAGTTGGAGAATTAATGCTTTTTCCTTATGGTATTCAGAGGGAAAACTTGGTTAATTATCAGAGATGGACCCAGGAATCTATTCTGAGTGCAGCTGATATATATGCTATGATTGGAAGTCCACCCATATTTCGGTTAAGGTATGGTTGGTTCTCCAATACTGAACTTGGGTTATTAAATATGCAAGTGACTGTAGCATCCGGCTCCATGCTCACACAATCCAAAAGTAGTGTATATTCTAAGGATCGGATTATGAATTCGGTTTCATTTCCTACACCATCAACTAATAGTCATTCCTTGGAGCTCTCTGAAGATTGCAGAATATCCATGAACAGAAATCATACTCTTATGACCTCTTCACCTGATGTGCCTAACACTAGAGGCAACAATGCTCACCCAAATACAAGCTCTGAGGAATCTCGTCGTCCTACAGCCAACTCATTGTGGCATGAAAAAGATGTTAGGGATGGAGCTGTAACTACGCAGTTAGAAGACTTGGATGAGTTAAAATTAAGCAGTGGAACAGGACAGTCCGCTGGAGAATGGGCTGACAGCCTTACCAACATTAGTGTGGGGGATCTACTTTCAGGAGTGTCCCAGGATCTCGAAGATGACTGCATCAATCCTCCTATTGCTGAGAATTGTCATGATATTCAGCAAATTCCTTTTAGTAGTGATTCTTTTGATGCTGCTATTGCTGCTCACATATCCAGACACCAAGACAAGATGGGACAATCATCGCTGGCAGCCCATATGTCTTCCATCTGGGATGCTGAAGAAACTTGTGATGCCTTTTTATTTCGAAAAGATCCTATTCTTCATGTAGATCGTCCTTGTTTGTCTCCAGTTGCTTCTTTAGAGTCTGAGAACAAGGTTCCTGAAAGAAGCTTTGAGAAATTGGACGAGTTCTCACCCGAAAGAGAGAGGCTTGTGGAAGATTTTGTTCAATCAGACCCTTTGCCTATGGACAACAGTTCCGAGTCTGACGCAGATATCCAGGATCATTTAGGAAAGGATTTTACTGCGCTAACAGATATATATTGGCCTGATTCCTTGGGACCTTTGGATTTGGATATACCATCATCAACTAAGTACCATACCGAAGATCTAATTTTTAGTGATAGTCTTAGTGGATTGAATCGCTTGATAGCAAGCAGCTTGGATGCATTTCAGAACTGCTCCTTTTTTGGGTTTGACAAGAAGGAAGCACCATCAACAGTTGAGGCTCGAGAATCTGCCACTCTTTCAGATTTTAAAATTGAAAGTGGTATCTGA 2397 0.4184 MEAEAQISHNSSTQFQPEPVVSVQNGDPGVSSYVANAVIPQQPATKKPTRQWAAWTRQEEESFFTALRQVGKNFEKITSRVQSKNKDQVRHYYYRLVRRMNKLLGPGLCLDAKNSKDTNAAMLRWWSLLEKYSCKASKLHLKPRRFKIFLEALEHQLLKDRKKNVRKRPLQGGNCLPPLPSTVSNQSRASGNEARAVKLVLVDSQNILKLGPSKSSMKRNINMGVSRSNTKGDSNAIKSTRQRKKSGMISTAAYKKWEKAAIAGVSLVADAAEHLERAATVREIEQDQENPGEKCFDPTDYVLPSLPTCPQNQFVDNNVNNMKLKLQLFPIDEPTRRALEVDKHNPHLELTLSTRKKISSILEHLNRKWGHSSIAVGELMLFPYGIQRENLVNYQRWTQESILSAADIYAMIGSPPIFRLRYGWFSNTELGLLNMQVTVASGSMLTQSKSSVYSKDRIMNSVSFPTPSTNSHSLELSEDCRISMNRNHTLMTSSPDVPNTRGNNAHPNTSSEESRRPTANSLWHEKDVRDGAVTTQLEDLDELKLSSGTGQSAGEWADSLTNISVGDLLSGVSQDLEDDCINPPIAENCHDIQQIPFSSDSFDAAIAAHISRHQDKMGQSSLAAHMSSIWDAEETCDAFLFRKDPILHVDRPCLSPVASLESENKVPERSFEKLDEFSPERERLVEDFVQSDPLPMDNSSESDADIQDHLGKDFTALTDIYWPDSLGPLDLDIPSSTKYHTEDLIFSDSLSGLNRLIASSLDAFQNCSFFGFDKKEAPSTVEARESATLSDFKIESGI* 799
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g2692 798 PANTHER CRAMPED PROTEIN 25 774 - -
Pvu3g2692 798 MobiDBLite consensus disorder prediction 163 188 - -
Pvu3g2692 798 MobiDBLite consensus disorder prediction 489 524 - -
Pvu3g2692 798 PANTHER PROTEIN CRAMPED-LIKE 25 774 - -
Pvu3g2692 798 Gene3D - 55 120 - -
Pvu3g2692 798 MobiDBLite consensus disorder prediction 218 244 - -
Pvu3g2692 798 SUPERFAMILY Homeodomain-like 46 101 IPR009057 -
Pvu3g2692 798 MobiDBLite consensus disorder prediction 489 517 - -
Pvu3g2692 798 SMART sant 51 99 IPR001005 -
Pvu3g2692 798 Pfam Myb-like DNA-binding domain 54 96 IPR001005 -
Pvu3g2692 798 ProSiteProfiles Myb-like domain profile. 47 97 IPR001005 -
Pvu3g2692 798 CDD SANT 54 97 IPR001005 -
Pvu3g2692 798 ProSiteProfiles SANT domain profile. 55 101 IPR017884 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g2692 Pvu-Chr3 48946895 48953761 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Pvu3g2692 Myb_DNA-binding 5.8e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g2692 - - gmx:100798411 1375.53