Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g2690 ATGATCACAGCACCTTTTTCCACACCCACTGCTACTTTCTCCCCTCAAAGCGTCTCCTCACGGCAGCGCCACATCAAATTCCGCTCAACTGTATCCTTTGCCGCCGCAACCGCCACCGCCACCTCCATCGATGTTCTGAGCCCTCAAAGCATGGCTTCCTGCACCACGCTTTACGAGGTTCTTGGAGTCCGTCCCGCCGCGTCGGAAGGAGAAATCAAAGCGGCGTACCGGCAACTGGTGAGGGTCTGTCACCCGGACGTGGCTCCGGTGGGGCAAAAGGAATCCTCTGCGGGCAAGTTCATGAAGATCCATAATGCGTATCGCACGCTTTTGAACCCCGAGAAGCGTGCCAAGTACGATAGAAGCTTGTTTCCACGTGGGCGAGTGGTCTCAACGGCGGCGTCTAGGGTTTCCAGCTACGGTGGTCGGAGATGGGAAACTGATCAGTGTTGGTAG 456 0.568 MITAPFSTPTATFSPQSVSSRQRHIKFRSTVSFAAATATATSIDVLSPQSMASCTTLYEVLGVRPAASEGEIKAAYRQLVRVCHPDVAPVGQKESSAGKFMKIHNAYRTLLNPEKRAKYDRSLFPRGRVVSTAASRVSSYGGRRWETDQCW* 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g2690 151 Pfam DnaJ domain 57 120 IPR001623 -
Pvu3g2690 151 ProSiteProfiles dnaJ domain profile. 56 123 IPR001623 -
Pvu3g2690 151 PANTHER DNAJ PROTEIN HOMOLOG-LIKE 1 151 - -
Pvu3g2690 151 SMART dnaj_3 55 115 IPR001623 -
Pvu3g2690 151 CDD DnaJ 56 112 IPR001623 -
Pvu3g2690 151 PANTHER DNAJ DOMAIN (PROKARYOTIC HEAT SHOCK PROTEIN)-RELATED 1 151 - -
Pvu3g2690 151 Gene3D DnaJ domain 42 139 IPR036869 -
Pvu3g2690 151 PRINTS DnaJ domain signature 58 76 IPR001623 -
Pvu3g2690 151 PRINTS DnaJ domain signature 76 91 IPR001623 -
Pvu3g2690 151 PRINTS DnaJ domain signature 95 115 IPR001623 -
Pvu3g2690 151 SUPERFAMILY Chaperone J-domain 50 123 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g2690 Pvu-Chr3 48926557 48927012 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g2690 58 120 C2H2 Transcription Factor Family AT1G74250 38.806 2.51e-07 47.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g2690 - - gmx:100795760 159.844
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g1121 2 21966015 21967589 Pvu3g2690 3 48926557 48927012 PCT