Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g2684 ATGAAGCGAGCAAGGAAATCCAACCGGGTTTCGTGGGCTACTGGAGGGAACCTGTGTCAGGTAAAATTGTTTTTGTCTGACGATTTCCCCTCAAAAGTAGGCCAACATTCTCAAGATCATCTTCAAGTAAAGACATCGATGCTAAATTCAAATTCCACTATAATTGATCCTAGTGATTTGCCCCCTGGGTTTGAAAGCAGTCATTTCCTAAAACAAACAAAGGTTGATTTCTCCAGCATTTCCCCGATAAAATGGGAATGCCCTCTGCCGTTTGTTGTCAGTCCTAAATGGTGTGTTGTAGCGGGTGAAGAAAGTAGGGAGAAAGAGAATCAGAAACTGAGAGAAAATAGGGTGCTTGAAGCTGTTTATCCCCGTCTTTCAGCCATTCCTCCTTGCCCTTCTGTCTCTTTGGACGTAGAAGAGGAAGATTATGATGATGACGTAACTCCCCTCATCCCTATCATTCCCATTGAAGAGGAAGAATCTATGGATATTTTACCTGAAGTGGCAGTAGCTGGGAACCCTTTCCCCTTGGATAACCCTCTGCAGTATATATCTGCTGAAACTTCCATTCGTTCACCCTCTAACTCCTTTTATACTGATTCCTCAGATCCCTGTACAGGGATCCCCTTGGGTGGAGTATCTTTTGGTTTGGAAGCTGATTTGGCAGCTTCGGTTGTTGCAACCATTATGAGGAGTTCTGAGCAAGGGTCCCCGATTGATATGGATTTACTGGTTAAAATATTTAATGATCCAAAAATACTCGACAAGTTGATTAATGAACATAGAACTGCAGCTACCACCATAAGTGCTTCCTCAAGTACTGTGGATACCACTCCTGGTGTAAAGCCTGCCATTCCAGTTCTGTTGTCTACATCTGCTGATGTGAAAGCTTCTGGGGCTACACATACAAGTGCAGTAGGTTCATTGCCTTTTGGGGTGAAAACTGCAAATTCATCAGTTGCAGCATTGAGTCCTACACCTGACAAGCCAGCCACTCTATCAGTGCCTGCAATTCCATCAGTTTCACTGTTGTCTTCGGCTCATGATAATCCTGTTACTGCATCAGTTCCAATGTCTAGGCCTGTATCTGGTAAGCGAGTAACACCCTCAGTTTCATTGCTCACAAATACACCTGCATCTCATATACCCAGGTCTGCTAGCAATCAAATTCACCATGTGTCAAGTGGGATTTCCCCTGTTTTAAATACTCAGTATCAACAAGATACAGCTCTGGCATCTGGGCCAAAGCGAGCCGCCGCAGTGGCGTCCGTATGTTCTGGTGAATTAAGCACTTTAAGCACTGGTCCATTGCCATCTCTTACGAGGAACTTGCATGCTGTTGTGAATCCGGTGCAATCCACTGCTAGTACATTGCCTTATAAACTAAGCACAGGTTCATCAGCATTTGCTGTAAAGGATGCCAACTACTATAAAAACCTCATCAGGCAACATGGTGCAGATAAGCAAGATATGCAGGACCCACACATAGGTTGGAGAGATTTGTGCAGTCACAGTGAAGTTGTGGCCATCCGTGGAGTTCTTTGGCGGATGTCACCTAGCCATAAATAA 1572 0.4447 MKRARKSNRVSWATGGNLCQVKLFLSDDFPSKVGQHSQDHLQVKTSMLNSNSTIIDPSDLPPGFESSHFLKQTKVDFSSISPIKWECPLPFVVSPKWCVVAGEESREKENQKLRENRVLEAVYPRLSAIPPCPSVSLDVEEEDYDDDVTPLIPIIPIEEEESMDILPEVAVAGNPFPLDNPLQYISAETSIRSPSNSFYTDSSDPCTGIPLGGVSFGLEADLAASVVATIMRSSEQGSPIDMDLLVKIFNDPKILDKLINEHRTAATTISASSSTVDTTPGVKPAIPVLLSTSADVKASGATHTSAVGSLPFGVKTANSSVAALSPTPDKPATLSVPAIPSVSLLSSAHDNPVTASVPMSRPVSGKRVTPSVSLLTNTPASHIPRSASNQIHHVSSGISPVLNTQYQQDTALASGPKRAAAVASVCSGELSTLSTGPLPSLTRNLHAVVNPVQSTASTLPYKLSTGSSAFAVKDANYYKNLIRQHGADKQDMQDPHIGWRDLCSHSEVVAIRGVLWRMSPSHK* 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g2684 523 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 45-RELATED 1 492 - -
Pvu3g2684 523 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 6-RELATED 1 492 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g2684 Pvu-Chr3 48873866 48881942 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g2684 - - pvu:PHAVU_003G260700g 995.342
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g2684 3 48873866 48881942 Pvu3g2684 3 48873866 48881942 ECH
Pvu3g2684 3 48873866 48881942 Pvu2g1136 2 22388793 22390576 ECH
Pvu2g1136 2 22388793 22390576 Pvu3g2684 3 48873866 48881942 PCT
Pvu3g2684 3 48873866 48881942 Pvu2g1137 2 22409712 22415185 PCT