Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g2682 ATGATGGAGTCATGTGTCCCACCGGGGTTTCGGTTCCACCCAACAGATGAAGAACTTGTGGGTTATTATCTCAGGAAAAAAGTTGCTTCTCAGAACATTGATCTTGACGTTATCAAAGAAATAGACCTATATCGTATTGAACCATGGGATCTCAAAGAGAGATGCAGGATTGGGTATGAGGAGCAGAATGAGTGGTATTTCTTTAGTCATAAAGATAAAAAATATCCAACTGGGACAAGAACGAACAGAGCTACCATGGCAGGGTTCTGGAAGGCGACAGGAAGAGACAAATCAGTGTACGAAAGGACCAAACTTATTGGCATGAGAAAGACCCTCGTTTTCTACAAAGGAAGAGCCCCTAATGGACAAAAAAGTGATTGGATCATGCACGAGTATAGGCTTGAAACTCTCGAGAATGGACCTCCACAGGAAGAAGGATGGGTTGTGTGCAGAGCCTTCAGGAAAAGAACTAACGGCCAAACAAAGAGTATTGAAGGATGGGATCGAAGCTACATATACGATGAACAAGCACGTGGTGTCAACTCTTCAGTGAACCCTATTGACCTCATGTTAAGGCAACCTCAGAGGAATCAAATTACAGCTAAAAGTTTCTTGTACAAGCAAGAGATAGAAGCAGATAATAATTTGAGGTTGATGCATGCAGAAGGAGTGATGCAGCTTCCTCAGCTAGAAAGTCCTTCCATGCCATTACTAATATCAGAGAATATTAACAACGAAAATGGTTCCCCAGAGGAATTATCCAACACAAAGAAAGTGACTGATTGGAGGGCACTTGACAAGTTTGTGGCATCTCAGTTGAGTCAAGAAGAGAGGCATGAAATAGAAGGGATGTCAAGCTTTGCAACTCATCACACTGGCTCGGACATGGCATTGTTGCTACTCCAGAATACTAATGAAAGGAACAAGTTCAACCCGTTTTTGAATACAAGTTCATCAGACTGTGACATTGGGATATGTGTATTTGAAAAATGA 993 0.4189 MMESCVPPGFRFHPTDEELVGYYLRKKVASQNIDLDVIKEIDLYRIEPWDLKERCRIGYEEQNEWYFFSHKDKKYPTGTRTNRATMAGFWKATGRDKSVYERTKLIGMRKTLVFYKGRAPNGQKSDWIMHEYRLETLENGPPQEEGWVVCRAFRKRTNGQTKSIEGWDRSYIYDEQARGVNSSVNPIDLMLRQPQRNQITAKSFLYKQEIEADNNLRLMHAEGVMQLPQLESPSMPLLISENINNENGSPEELSNTKKVTDWRALDKFVASQLSQEERHEIEGMSSFATHHTGSDMALLLLQNTNERNKFNPFLNTSSSDCDIGICVFEK* 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g2682 330 Gene3D NAC domain 15 160 IPR036093 GO:0003677|GO:0006355
Pvu3g2682 330 ProSiteProfiles NAC domain profile. 6 155 IPR003441 GO:0003677|GO:0006355
Pvu3g2682 330 PANTHER NAC DOMAIN-CONTAINING PROTEIN 76 4 308 - -
Pvu3g2682 330 SUPERFAMILY NAC domain 3 155 IPR036093 GO:0003677|GO:0006355
Pvu3g2682 330 Pfam No apical meristem (NAM) protein 7 134 IPR003441 GO:0003677|GO:0006355
Pvu3g2682 330 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 4 308 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g2682 Pvu-Chr3 48840801 48844236 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g2682 2 329 NAC Transcription Factor Family AT2G18060 59.016 3.75e-144 409
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pvu3g2682 NAM 1.3e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g2682 - - gmx:100803726 516.924
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g1145 2 22556838 22561334 Pvu3g2682 3 48840801 48844236 PCT