Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g2680 ATGGGAAGTGAGGATGTTGGAATAACTCAAAACAACACACTCATCACTAAATTTCTTCTTCTTCTTCTTCCCTCGACTACCATGACTAAATTTCTCATCCTCCTCTTATTCTGCGCACGCTTCTTATCATGCGCCCACTGCGCCTCCGTCACCGAGATCCAAGCCTTGACGTCCTTCAAGCTCAACCTTCACGACCCTCTCGGTGCGCTTAACGCCTGGGACCCGTCAACGCCGTTAGCTCCCTGCGACTGGCGTGGCGTTTATTGCGAAAACGACCGAGTCACCGAGTTACGCCTGCCTCGCCTTCAACTCAGTGGCCAGCTTGGTGACCGCATTTCTGACCTACGCATGCTTCGAAGGCTAAGCCTTCGCTCCAACTTCTTCAACGGCACCATTCCCCACTCTCTCTCCAAATGCACGCTTTTACGCGCCTTGTTCCTACAGTATAACGACCTCTCCGGCCAACTCCCTTCGGAGATCGGAAACCTCGCCGCTCTCCAGATTCTCAACGTCGCCGGCAACAACCTCTCCGGGAAAATCCCCACCGAACTTCCTCTCCATCTCAAATACGTTGACCTTTCCGCCAACGCCTTCTCCGGCGAGATTCCGACCACCATCCCCGGGCTTTCCGAGCTTCAGCTTATCAACCTCTCCTACAACAAGTTCTCCGGCCAGATTCCGGCGCGCATTGGAGAGCTTCAGAATCTGCAGTACCTTTGGCTCGATCACAATGTTCTCGACGGAACCTTACCTTCGTCTCTCGCGAATTGTTCCTCGCTCGTGCATTTGAGCGTCGAAGGGAACGCGCTCGCCGGGGTGTTACCGGCTGCGATTGCGGCTCTCCCGAACCTCCAGGTGTTGTCACTCGCGCAGAACAACTTCACCGGCACCGTTCCGGCTTCGGTTTTCTGCAACGTGTCGCTCAAAGCGCCGTCACTTCGCATAGTTCAGTTAGGGTTTAATCGTTTCACGGATTTCGCGTGGCCTCAAGCCGCCACGTGTTTCAGTGTTCTTGAGGTTTTGAATGTTCAGCAAAATAGCGTGCGCGGCATGTTTCCGCTGTGGTTAACGAACGTGATCACGCTGTCGGTTCTCGACATTTCTGGTAACGCACTTTCCGGCGAGGTTCCGCCGGAAATTGGAAATCTCTGGAAATTGGTAGAGCTGAAGATGGCCAATAATACGTTCTCAGGTGAGATTCCGCCGGAATTAGTAAAATGTAGGTCCCTGCGTGTTCTTGATTTCGAAGGAAACAGGTTTTCCGGTGTGGTTCCTTCGTTTATAGGAAATTTGACAACGCTGAAGGTTCTCTCTCTTGGTGTGAACCATTTCTCTGGTTCTGTTCCGGTGAGTTTTGGTGGGCTCCATTCTCTTGAAACTATGAGTTTAAGGGGTAATAGATTGAATGGTACAATGCCAGAAGAAGTGATGAGGTTGAAGAATTTGACTGTGTTGGACCTCAGTGGAAACCAGTTTTCGGGTCATGTTTCTGGGGAAATTGGGAATCTGAGTAAATTAATGGTTCTGAATCTGAGTGGTAATGGCTTCTATGGGGAAATTCCTTCCACTTTGGGGAATCTTTTCAGGCTCACTACACTTGATTTGAGCAAACAAAATCTCTCCGGCAAATTGCCATATGAAATTTCCGGGCTTCCCAGTTTGCAGGTCATTGCTCTTCAAGAGAACAAGTTGTCTGGGGTGATCCCTGAAGGGTTTAGCAGCTTGACCAGTTTGAAATATGTGAACCTAAGCTCCAACGAGTTTTCTGGGCATGTTCCTAAGAGCTATGGCTTCCTCCGATCGTTGGTTGTTCTTTCATTGTCTGATAACCGCATCATGGGAATGATTCCCCCGGAAATTGGAAACTGCCCTGACATTGAAATTCTCGAGCTTAGATCAAATCACTTGGGGGGTCCCATTCCCACGGATCTCTCTGGCCTAGCCCATTTGAAAGTCCTTGATTTAGGTAAAAACAACTTAACTGGGGCTTTGCCTGAGGATATCTCCAAATGCTCAGAGTTAACAGTTATGTTAGCAGATCACAACCAACTTTCGGGTGCTATACCAGGGTCATTGGCCAAGTTATCATACCTAAGTATGCTGGATCTCTCGGCCAATAAATTGAGTGGCGAAATTCCCAGTAATCTAAACACCATCCCTGGTTTGGTGTACTTCAATGTCTCAGGCAACAACTTAGAAGGTGAGATTCCACCAATGTTGGGTTCTAAATTCAACAACTCCGCTGTATTTGCTGGCAACCAGAACTTGTGCGGGAAGCCATTGAATAGAAAGTGCGAAGAGACAGACAGTAGGGAGAGAAATAGGTTGATAGTGTTAATCATTATCATCGCGGTTGGAGGCTGCTTATTGGCTTTGTGTTGCTGCTTCTACATCACCAGCCTTCTGAGATGGCGCAGAAGGATTAAAGCAGCAGTGTCAGGGGAGAAGAAAAAGAGTCCAAGAACAAGTTCGGGAACAAGTCAAGGTCGAAGCAGCACTGACTCCAACGGACCAAAACTCGTCATGTTCAACGCCAAAATCACACTCGCCGAAACAATTGAAGCAACGAGGCAATTCGACGAAGAAAGCGTGCTGAGCAGAACAAAACACGGTTTAGTATTCAAGGCCTGCTACAACGACGGAATGGTTCTTTCCATTCGCAAGCTACAGCACGGGTCACTAGACGAAAACATGTTCAGAAAAGAAGCCGAATCGATAGGAAAAATCAGGCACCGAAACCTAACCGTTCTCAGAGGCTACTATGCAGGTCCATCGGATGTTAGACTCCTGGTCTACGATTACATGCCCAATGGGAACCTCGCAACGTTGCTCCAAGAAGCATCACACCTAGACGGTCACGTTCTGAATTGGCCAATGCGACACCTCATTGCATTAGGAATAGCCCGTGGCATCGCGTTTCTACACCAATCCTCACTTGTCCACGGTGACATCAAACCCCAAAACGTGCTCTTTGATGCAGACTTCGAAGCCCATTTATCAGATTTCGGGTTGGACAAGTTAACAGTTACCGACCCAGTTGAAGCCTCCACTTCAAGCACTGCTTCAGTTGGCACGTTGGGTTACGTGTCCCCAGAGGCTGTGCTAACAGGGGAACCCACGAAAGAGTGTGACGTGTACAGCTTCGGCATCGTTTTGCTGGAACTTCTCACTGGGAAGAGACCAGTGATGTTCACGCAGGATGAGGATATAGTGAAGTGGGTGAAGAAACAGTTACAGAACGGTCAAATTACGGAGCTACTAGAGCCTGGTTTGTTTGAACTGGACCCAGAGTCTTCGGAATGGGAAGAGTTCTTGCTGGGCGTGAAAGTTGGTCTGCTTTGCACAGCACCAGACCCTCTTGATCGACCAACCATGGCTGACATCGTGTTCATGCTTGAAGGTTGTCGTGTTGGACCCGACATTGCATCCTCCGCTGAACCCACGACGCAACCTTCTCCGGTGTAA 3465 0.4918 MGSEDVGITQNNTLITKFLLLLLPSTTMTKFLILLLFCARFLSCAHCASVTEIQALTSFKLNLHDPLGALNAWDPSTPLAPCDWRGVYCENDRVTELRLPRLQLSGQLGDRISDLRMLRRLSLRSNFFNGTIPHSLSKCTLLRALFLQYNDLSGQLPSEIGNLAALQILNVAGNNLSGKIPTELPLHLKYVDLSANAFSGEIPTTIPGLSELQLINLSYNKFSGQIPARIGELQNLQYLWLDHNVLDGTLPSSLANCSSLVHLSVEGNALAGVLPAAIAALPNLQVLSLAQNNFTGTVPASVFCNVSLKAPSLRIVQLGFNRFTDFAWPQAATCFSVLEVLNVQQNSVRGMFPLWLTNVITLSVLDISGNALSGEVPPEIGNLWKLVELKMANNTFSGEIPPELVKCRSLRVLDFEGNRFSGVVPSFIGNLTTLKVLSLGVNHFSGSVPVSFGGLHSLETMSLRGNRLNGTMPEEVMRLKNLTVLDLSGNQFSGHVSGEIGNLSKLMVLNLSGNGFYGEIPSTLGNLFRLTTLDLSKQNLSGKLPYEISGLPSLQVIALQENKLSGVIPEGFSSLTSLKYVNLSSNEFSGHVPKSYGFLRSLVVLSLSDNRIMGMIPPEIGNCPDIEILELRSNHLGGPIPTDLSGLAHLKVLDLGKNNLTGALPEDISKCSELTVMLADHNQLSGAIPGSLAKLSYLSMLDLSANKLSGEIPSNLNTIPGLVYFNVSGNNLEGEIPPMLGSKFNNSAVFAGNQNLCGKPLNRKCEETDSRERNRLIVLIIIIAVGGCLLALCCCFYITSLLRWRRRIKAAVSGEKKKSPRTSSGTSQGRSSTDSNGPKLVMFNAKITLAETIEATRQFDEESVLSRTKHGLVFKACYNDGMVLSIRKLQHGSLDENMFRKEAESIGKIRHRNLTVLRGYYAGPSDVRLLVYDYMPNGNLATLLQEASHLDGHVLNWPMRHLIALGIARGIAFLHQSSLVHGDIKPQNVLFDADFEAHLSDFGLDKLTVTDPVEASTSSTASVGTLGYVSPEAVLTGEPTKECDVYSFGIVLLELLTGKRPVMFTQDEDIVKWVKKQLQNGQITELLEPGLFELDPESSEWEEFLLGVKVGLLCTAPDPLDRPTMADIVFMLEGCRVGPDIASSAEPTTQPSPV* 1155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g2680 1154 Gene3D Ribonuclease Inhibitor 187 277 IPR032675 -
Pvu3g2680 1154 SUPERFAMILY Protein kinase-like (PK-like) 839 1139 IPR011009 -
Pvu3g2680 1154 MobiDBLite consensus disorder prediction 813 838 - -
Pvu3g2680 1154 Gene3D Ribonuclease Inhibitor 498 774 IPR032675 -
Pvu3g2680 1154 Gene3D Ribonuclease Inhibitor 281 497 IPR032675 -
Pvu3g2680 1154 ProSiteProfiles Protein kinase domain profile. 859 1141 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu3g2680 1154 Pfam Leucine rich repeat 187 246 IPR001611 GO:0005515
Pvu3g2680 1154 Pfam Leucine rich repeat 552 612 IPR001611 GO:0005515
Pvu3g2680 1154 Pfam Leucine rich repeat 408 468 IPR001611 GO:0005515
Pvu3g2680 1154 Pfam Leucine rich repeat 627 684 IPR001611 GO:0005515
Pvu3g2680 1154 Gene3D Phosphorylase Kinase; domain 1 822 934 - -
Pvu3g2680 1154 SMART serkin_6 859 1131 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu3g2680 1154 Gene3D Ribonuclease Inhibitor 49 186 IPR032675 -
Pvu3g2680 1154 MobiDBLite consensus disorder prediction 817 838 - -
Pvu3g2680 1154 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 28 1150 - -
Pvu3g2680 1154 SMART LRR_sd22_2 695 718 - -
Pvu3g2680 1154 SMART LRR_sd22_2 479 505 - -
Pvu3g2680 1154 SMART LRR_sd22_2 647 670 - -
Pvu3g2680 1154 SMART LRR_sd22_2 281 308 - -
Pvu3g2680 1154 SMART LRR_sd22_2 233 256 - -
Pvu3g2680 1154 Pfam Leucine rich repeat N-terminal domain 52 89 IPR013210 -
Pvu3g2680 1154 Pfam Protein kinase domain 869 1128 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu3g2680 1154 SMART LRR_typ_2 281 305 IPR003591 -
Pvu3g2680 1154 SMART LRR_typ_2 479 502 IPR003591 -
Pvu3g2680 1154 SMART LRR_typ_2 163 187 IPR003591 -
Pvu3g2680 1154 SMART LRR_typ_2 233 257 IPR003591 -
Pvu3g2680 1154 SMART LRR_typ_2 599 623 IPR003591 -
Pvu3g2680 1154 SMART LRR_typ_2 115 139 IPR003591 -
Pvu3g2680 1154 SMART LRR_typ_2 647 671 IPR003591 -
Pvu3g2680 1154 SMART LRR_typ_2 503 527 IPR003591 -
Pvu3g2680 1154 SMART LRR_typ_2 431 454 IPR003591 -
Pvu3g2680 1154 SMART LRR_typ_2 551 574 IPR003591 -
Pvu3g2680 1154 SUPERFAMILY L domain-like 81 354 - -
Pvu3g2680 1154 SUPERFAMILY L domain-like 360 599 - -
Pvu3g2680 1154 SUPERFAMILY L domain-like 520 759 - -
Pvu3g2680 1154 Gene3D Transferase(Phosphotransferase) domain 1 935 1143 - -
Pvu3g2680 1154 PANTHER INACTIVE LEUCINE-RICH REPEAT RECEPTOR KINASE XIAO-RELATED 28 1150 - -
Pvu3g2680 1154 ProSitePatterns Serine/Threonine protein kinases active-site signature. 979 991 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g2680 Pvu-Chr3 48827174 48831119 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g2680 31 1154 Receptor kinase-like Gene Family AT4G36180 65.757 0.0 1449
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-3 Pvu3g2680 Pkinase 1.2e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g2680 - - vun:114175753 2053.1