Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g2668 ATGGATTTACTCCTACCATTGTTAATAATCCCGTTCACGTTGGTGCTGTGGGTTTTACTGTCTCCAATTCGCACAAAAACGGCGCCGTATCCACCGGGGCCAAAAGGCCTTCCGATCATAGGCAACATCAACATCATGGATCAGCTCACACACAGAGGCTTGGCCAAACTCGCCAAGAAATACGGCGGCGTTTTGCACCTCCGCATCGGCTTCCTCCACACGGTCGCCATTTCAAATGCGGAAGCGGCGCGTGAAGTGCTCCAAGCCCAAGACAACATATTCTCCAACCGCCCTGCCACCGCAGCCATCAGGCACCTAACCTACGACCGCGCCGACATGGCTTTCGCTCACTACGGACCCTTCTGGCGACAGATGCGCAAAATCTGTGTCATCAAACTCTTCAGCCGCAAGCGCGCAGAGTCCTGGAACTCCGTCAGAGACGAAGTCGACACCGTCGTCCGCGCCGTCGCGGCGAACGTGGGCAACCCCGTTAACGTGGGGGAACTGGTGTTTAACCTCACGAAAAACATCACCTACCGCGCCGCTTTCGGGTCCAGTTCCCAACAAGGACAGGAGAAGTTCATTTCAATTATTCAGGAGTTTTCAGTGTTGTTTGGGGCCTTCAATATTGCGGACTTTGTGCCTTGTATCGGGTGGATTGATCCTCAGGGCCTCAACTTGAGACTGGTGCAGGCACGCGCCGCCTTGGATAGCTTCATTGATAAGATAATTGAGGAGCATGTGGAGAAGAAGAGGAGTGGGAAGAGTTGTGAGGATGAAAGTGACATGGTTGATGAGTTGCTGAACTTTTACAGTGAAAATCCCAAATTGAATGAAGAATCAAACGACCTACACACCTCCATCACACTCACCAAAGACAACATCAAAGCCATAATAATGGATGTCATGTTCGGAGGGACCGAAACGGTGGCATCAGCAATTGAATGGACGATGACGGAGCTAATGAGAAGCCCAGAAGACCTGCGGCGCGTGCAGCAAGAACTCGCTGACGTGGCGGGTCTGGACCGGCGCGTGGAGGAATCAGACATTGAAAAGCTCGTCTTTCTGAAATGTGTTCTGAAGGAGACGCTGCGGTTGCACCCGCCGATTCCTCTTCTCCTCCACGAGGCGGCGGAGGACGCGGTGGTGTGTGGGTACCACGTGCCGAAGGGGTCGCGGCTGATGATAAACGCGTGGGCCATAGGAAGGGACGGGGACTCGTGGGAGGAGCCGGAAGCGTTCAAGCCGTCGCGTTTTTTGAAGTCTAGCGTGCCCGATTTCAAAGGGAGCAACTTCGAGTTCATTCCGTTCGGGTCGGGTCGGAGATCCTGCCCCGGAATGCAACTGGGTCTTTACGCGCTGGAAGTGGCCGTGGCGCACTTGCTTCACTGCTTCACGTGGGAGTTACCCGATGGGTTGAAACCCAGTGAGTTGGACACGAGTGACGTGTTCGGACTCACCGCGCCCAGGGCGAGTCGACTCGTGGCGATTCCGTCGAAACGTGTGTTATGTCCTCTCTAA 1521 0.5457 MDLLLPLLIIPFTLVLWVLLSPIRTKTAPYPPGPKGLPIIGNINIMDQLTHRGLAKLAKKYGGVLHLRIGFLHTVAISNAEAAREVLQAQDNIFSNRPATAAIRHLTYDRADMAFAHYGPFWRQMRKICVIKLFSRKRAESWNSVRDEVDTVVRAVAANVGNPVNVGELVFNLTKNITYRAAFGSSSQQGQEKFISIIQEFSVLFGAFNIADFVPCIGWIDPQGLNLRLVQARAALDSFIDKIIEEHVEKKRSGKSCEDESDMVDELLNFYSENPKLNEESNDLHTSITLTKDNIKAIIMDVMFGGTETVASAIEWTMTELMRSPEDLRRVQQELADVAGLDRRVEESDIEKLVFLKCVLKETLRLHPPIPLLLHEAAEDAVVCGYHVPKGSRLMINAWAIGRDGDSWEEPEAFKPSRFLKSSVPDFKGSNFEFIPFGSGRRSCPGMQLGLYALEVAVAHLLHCFTWELPDGLKPSELDTSDVFGLTAPRASRLVAIPSKRVLCPL* 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g2668 506 PANTHER CYTOCHROME P450 84A1-RELATED 7 506 - -
Pvu3g2668 506 Pfam Cytochrome P450 31 490 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu3g2668 506 SUPERFAMILY Cytochrome P450 31 501 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu3g2668 506 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 437 446 IPR017972 GO:0005506|GO:0016705
Pvu3g2668 506 PRINTS P450 superfamily signature 305 322 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu3g2668 506 PRINTS P450 superfamily signature 358 369 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu3g2668 506 PRINTS P450 superfamily signature 435 444 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu3g2668 506 PRINTS P450 superfamily signature 444 455 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu3g2668 506 Gene3D Cytochrome P450 23 499 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu3g2668 506 PRINTS E-class P450 group I signature 58 77 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu3g2668 506 PRINTS E-class P450 group I signature 82 103 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu3g2668 506 PRINTS E-class P450 group I signature 294 311 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu3g2668 506 PRINTS E-class P450 group I signature 314 340 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu3g2668 506 PRINTS E-class P450 group I signature 357 375 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu3g2668 506 PRINTS E-class P450 group I signature 397 421 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu3g2668 506 PRINTS E-class P450 group I signature 434 444 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu3g2668 506 PRINTS E-class P450 group I signature 444 467 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Pvu3g2668 506 PANTHER CYTOCHROME P450 FAMILY FERULATE HYDROXYLASE 7 506 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g2668 Pvu-Chr3 48735535 48738577 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g2668 38 506 Monolignol Biosynthesis Gene Families AT4G36220 71.670 0.0 728
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g2668 K09755 - gmx:100807448 837.41
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g1156 2 22774390 22777865 Pvu3g2668 3 48735535 48738577 PCT