Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g2654 ATGTCAACGGAAGCGCCCAAGCGCCACCAATGGCAGTGGGAGAACGCCGCCGCCGGCGCTGCTGCTGGATTCGCCACCGTTGCCGTTATGTATCCCCTCGATGTTGTCCGCACTAGGTTTCAAGTTAACGACGGTCGAGTCTCTCATCTTCCCAGTTACAAGAACACCGGTCACGCCGTTTTCACCATTGCACGCTCCGAGGGATTAAGAGGGTTATATGCGGGCTTTCTTCCTGGAACTCTCGGGTCCACTATTTCATGGGGTTTATATTTCTTTTTCTATGATAAAGCCAAACAAAGATACGCAAGGAACGGGGAGGGGAAATTGAGTCCAGGTCTTCATCTTGCCTCGGCTGCTGAAGCGGGAGGTTTGGTTTGCCTGTGCACAAATCCTGTTTGGCTTGTAAAGACAAGATTGCAGCTTCAAACTCAGCTCCATCAGACGCGACCATACACTGGGCTTTGTGATGCATTTAGGACCATAACGAGGGAAGAGGGATTTAGTGCACTTTACAGAGGCATTGTTCCTGGCCTATTTCTGCAGGTCTGTCATGGTGCTATTCAGTTCACAGCATATGAGGAGCTCCGTAAAGTTATTATTGATTTTAAGAGTAAGAGAAGTACATTACATAATCAAAGTTCTGATAAATTGTTGAATTCTGTTGATTACGCTGTTCTTGGAGCAACATCAAAACTAGCTGCAATGCTGCTAACCTATCCATTTCAGGTTATGCGGTCTCGCTTGCAGCAACGACCTAGTGGCGATGGGGTTCTAAGATATATGGATACTTGGCATGTAATGAAAGAAACTGCACGATTTGAAGGTATGCGGGGGTTTTACAAAGGAATTACCGCAAACCTCTTGAAAAATGCTCCTGCTTCCTCAATAACATTTATTGTTTATGAAAATGTTATAAAATTGCTTAAACCGACTATAAGGAATGACTGA 948 0.4536 MSTEAPKRHQWQWENAAAGAAAGFATVAVMYPLDVVRTRFQVNDGRVSHLPSYKNTGHAVFTIARSEGLRGLYAGFLPGTLGSTISWGLYFFFYDKAKQRYARNGEGKLSPGLHLASAAEAGGLVCLCTNPVWLVKTRLQLQTQLHQTRPYTGLCDAFRTITREEGFSALYRGIVPGLFLQVCHGAIQFTAYEELRKVIIDFKSKRSTLHNQSSDKLLNSVDYAVLGATSKLAAMLLTYPFQVMRSRLQQRPSGDGVLRYMDTWHVMKETARFEGMRGFYKGITANLLKNAPASSITFIVYENVIKLLKPTIRND* 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g2654 315 ProSiteProfiles Solute carrier (Solcar) repeat profile. 10 100 IPR018108 -
Pvu3g2654 315 SUPERFAMILY Mitochondrial carrier 12 303 IPR023395 -
Pvu3g2654 315 ProSiteProfiles Solute carrier (Solcar) repeat profile. 109 198 IPR018108 -
Pvu3g2654 315 PANTHER BNAA09G07970D PROTEIN 10 309 - -
Pvu3g2654 315 PANTHER MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED 10 309 IPR044712 GO:0006862|GO:0055085
Pvu3g2654 315 ProSiteProfiles Solute carrier (Solcar) repeat profile. 218 307 IPR018108 -
Pvu3g2654 315 Gene3D Mitochondrial carrier domain 104 313 IPR023395 -
Pvu3g2654 315 Gene3D Mitochondrial carrier domain 2 103 IPR023395 -
Pvu3g2654 315 Pfam Mitochondrial carrier protein 109 200 IPR018108 -
Pvu3g2654 315 Pfam Mitochondrial carrier protein 11 103 IPR018108 -
Pvu3g2654 315 Pfam Mitochondrial carrier protein 221 309 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g2654 Pvu-Chr3 48543992 48552888 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g2654 32 308 Chloroplast and Mitochondria Gene Families AT2G47490 36.972 1.43e-44 152
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g2654 K15115 - gmx:100809599 536.954
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g2654 3 48543992 48552888 Pvu3g2654 3 48543992 48552888 ECH