Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g2619 ATGGCATCATCTTGGACTCAGAGGCAGAACAAATTGTTTGAACAAGCCCTGGCTTTATATGACAGGGAAACCCCTGACAGATGGCAGAATGTTGCCAATGTGGTGGGAAAATCAGTAGAGGATGTCAAAAGGCACTATGAGATCCTCAAAGAAGATATCAAACGCATTGAACATGGCCAAGTCCCGTTTCCTCGTTACTAA 201 0.4428 MASSWTQRQNKLFEQALALYDRETPDRWQNVANVVGKSVEDVKRHYEILKEDIKRIEHGQVPFPRY* 67
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g2619 66 ProSiteProfiles SANT domain profile. 1 54 IPR017884 -
Pvu3g2619 66 SUPERFAMILY Homeodomain-like 3 57 IPR009057 -
Pvu3g2619 66 SMART sant 1 52 IPR001005 -
Pvu3g2619 66 Gene3D - 2 63 - -
Pvu3g2619 66 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 1 66 IPR044636 GO:0003700
Pvu3g2619 66 CDD SANT 4 50 IPR001005 -
Pvu3g2619 66 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g2619 Pvu-Chr3 48232266 48233623 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g2619 - - pvu:PHAVU_003G254400g 139.813
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g2619 3 48232266 48233623 Pvu2g0321 2 3219506 3221207 ECH
Pvu11g0461 11 3874859 3876374 Pvu3g2619 3 48232266 48233623 ECH
Pvu3g2619 3 48232266 48233623 Pvu3g2619 3 48232266 48233623 ECH
Pvu2g0321 2 3219506 3221207 Pvu3g2619 3 48232266 48233623 ECH