LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pvu3g2603	ATGTCTTCCCCAGATAAGAAATCCGCTCCTCATAACAACACACCCGATAACGCCACCCCCGATGACGCCACCCCCGATAACGCCACTCCCGACAATGCCACGCCCAACAATGCCACGCCCGACAATGCCACGCCCAACAATGCCACGCCCGATAATTCAAAGGGTTCCTCATCATCATCGTCGTCTTCGTCCACTCCTTCAGCCAAAGAGACGCACAAAGCGCTGTCGCATGAAAAGATGTCGAGTACAGAGAAAGACAATGGTGGCACCGATAAAGCAGCATTGGGAGCTGGGATTGGAGTTGGGTTTGTCCTTCTCGTGTTGATCATTGTGTGTTTTGTTTGGTGTTGCAGAAGGAAGAAGCGAAAGCAGAAGAAGTACTACTACGCATCTCCTTCTAAAGGAAAAGGCAATTATTACAACACTGGGCAAAATTCTCTCCCTAATTGGCAACAAGGACCTGGTCCTCTCGGGAATGACCATGTGGTGAGGGTTCAACAACAAGGGATGGGGATGCAGATGGGAATGGGGATGCAAATGGGAATGGGAATGGCTCCTCCTAGTGGTGGTGGTGGTGGTGGTGGCTGGGGTACATCCCATCCCCAAATGAGCAGTGGTGATATGAGCTCTAATTACTCAGTGGGAATGGGTTCCACATCGCCAGGCCTTTCTCTCACACTCAAGGGTGGTACCTTCACTTATGAGGAGCTAGCAGCTGCCACCAAAGGATTTGCCAATGACCAGATTATTGGACAAGGTGGCTTTGGCTATGTCCATAAGGGAGTTTTACCTAATGGAAAGGAAGTGGCTGTTAAGAGTCTAAAAGCAGGTAGTGGACAAGGAGAACGCGAGTTCCAAGCTGAGATTGACATCATTAGTCGAGTTCATCATCGTCATCTTGTGTCACTTGTTGGATATTGCATTTGTGGAGGCCAAAGAATGTTGGTCTATGAATTTGTTCCCAACTCAACTTTGGAACATCACCTTCATGGAAAAGGTATGCCTACCATGGATTGGCCTTCTAGAATGCGAATTGCAATGGGATCTGCCAAAGGGCTTGCATACCTTCATGAAGATTGTAGCCCTCGCATCATCCATCGTGACATTAAAGCTTCTAACGTTCTTCTTGATGATAGTTTTGAAGCAAAGGTGTCTGATTTTGGACTCGCAAAGTTGACTTCTGATAATAATACACATGTCTCAACTCGTGTCATGGGAACATTCGGGTACTTGGCCCCAGAATACGCATCAAGTGGAAAATTGACAGAGAAGTCTGATGTTTTCTCATTTGGGGTCATGCTATTGGAACTCATAACCGGGAAACGGCCTGTAGATTCGTCAAATGTCATGGAGGACAGTTTAGTGGATTGGGCTCGACCACTCCTGAATAAAGGATTGGAGGATGGCAACTTTGGAGGGTTGGTGGATCCATTTTTGGAAGGCAACTACAATACCCAGGAAATGACAAGAATGGCAGCTTGCGCAGCTGCAAGCATTCGTCATTCGGCTAGGAAGCGTTCAAAAATGAGCCAGATTGTGAGAGCGCTGGAAGGAGATGTGTCATTGGAAGACTTGAAAGAAACGAAACTTGCAGGGAATGGGAATGGGAATGGGAATAGCAGTGCTTTCATTTCTTCATCTGGAAGCTCAGAATATGATACCATGCAATACAATGCTGATATGATTAAGTTCAGACAGGCAATAATGTCGAGCCAAGAATTTAATGACAGTGGTGAGCTTTCCAGTAAGGAGATGGCTTATCATTAG	1767	0.4669	MSSPDKKSAPHNNTPDNATPDDATPDNATPDNATPNNATPDNATPNNATPDNSKGSSSSSSSSSTPSAKETHKALSHEKMSSTEKDNGGTDKAALGAGIGVGFVLLVLIIVCFVWCCRRKKRKQKKYYYASPSKGKGNYYNTGQNSLPNWQQGPGPLGNDHVVRVQQQGMGMQMGMGMQMGMGMAPPSGGGGGGGWGTSHPQMSSGDMSSNYSVGMGSTSPGLSLTLKGGTFTYEELAAATKGFANDQIIGQGGFGYVHKGVLPNGKEVAVKSLKAGSGQGEREFQAEIDIISRVHHRHLVSLVGYCICGGQRMLVYEFVPNSTLEHHLHGKGMPTMDWPSRMRIAMGSAKGLAYLHEDCSPRIIHRDIKASNVLLDDSFEAKVSDFGLAKLTSDNNTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGKRPVDSSNVMEDSLVDWARPLLNKGLEDGNFGGLVDPFLEGNYNTQEMTRMAACAAASIRHSARKRSKMSQIVRALEGDVSLEDLKETKLAGNGNGNGNSSAFISSSGSSEYDTMQYNADMIKFRQAIMSSQEFNDSGELSSKEMAYH*	589

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Annotation information

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Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Pvu3g2603	588	ProSiteProfiles	Protein kinase domain profile.	244	504	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
Pvu3g2603	588	SMART	serkin_6	244	479	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
Pvu3g2603	588	Gene3D	Transferase(Phosphotransferase) domain 1	320	532	-	-
Pvu3g2603	588	SUPERFAMILY	Protein kinase-like (PK-like)	224	516	IPR011009	-
Pvu3g2603	588	ProSitePatterns	Protein kinases ATP-binding region signature.	250	272	IPR017441	GO:0005524
Pvu3g2603	588	MobiDBLite	consensus disorder prediction	1	70	-	-
Pvu3g2603	588	MobiDBLite	consensus disorder prediction	1	88	-	-
Pvu3g2603	588	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	364	376	IPR008271	GO:0004672\|GO:0006468
Pvu3g2603	588	Gene3D	Phosphorylase Kinase; domain 1	218	319	-	-
Pvu3g2603	588	PANTHER	RECEPTOR-LIKE KINASE	8	587	-	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Pvu3g2603	Pvu-Chr3	48083242	48086942	Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pvu3g2603	86	581	Trihelix Transcription Factor Family	AT1G70460	50.297	5.63e-151	449

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Transcription factors information

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Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_PERK-1	Pvu3g2603		PK_Tyr_Ser-Thr	1e-46	CL0016

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pvu3g2603	-		-	gmx:100805872	767.303

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Event-related genes

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Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Pvu2g0300	2	3035320	3043539	Pvu3g2603	3	48083242	48086942	PCT

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