Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g2603 ATGTCTTCCCCAGATAAGAAATCCGCTCCTCATAACAACACACCCGATAACGCCACCCCCGATGACGCCACCCCCGATAACGCCACTCCCGACAATGCCACGCCCAACAATGCCACGCCCGACAATGCCACGCCCAACAATGCCACGCCCGATAATTCAAAGGGTTCCTCATCATCATCGTCGTCTTCGTCCACTCCTTCAGCCAAAGAGACGCACAAAGCGCTGTCGCATGAAAAGATGTCGAGTACAGAGAAAGACAATGGTGGCACCGATAAAGCAGCATTGGGAGCTGGGATTGGAGTTGGGTTTGTCCTTCTCGTGTTGATCATTGTGTGTTTTGTTTGGTGTTGCAGAAGGAAGAAGCGAAAGCAGAAGAAGTACTACTACGCATCTCCTTCTAAAGGAAAAGGCAATTATTACAACACTGGGCAAAATTCTCTCCCTAATTGGCAACAAGGACCTGGTCCTCTCGGGAATGACCATGTGGTGAGGGTTCAACAACAAGGGATGGGGATGCAGATGGGAATGGGGATGCAAATGGGAATGGGAATGGCTCCTCCTAGTGGTGGTGGTGGTGGTGGTGGCTGGGGTACATCCCATCCCCAAATGAGCAGTGGTGATATGAGCTCTAATTACTCAGTGGGAATGGGTTCCACATCGCCAGGCCTTTCTCTCACACTCAAGGGTGGTACCTTCACTTATGAGGAGCTAGCAGCTGCCACCAAAGGATTTGCCAATGACCAGATTATTGGACAAGGTGGCTTTGGCTATGTCCATAAGGGAGTTTTACCTAATGGAAAGGAAGTGGCTGTTAAGAGTCTAAAAGCAGGTAGTGGACAAGGAGAACGCGAGTTCCAAGCTGAGATTGACATCATTAGTCGAGTTCATCATCGTCATCTTGTGTCACTTGTTGGATATTGCATTTGTGGAGGCCAAAGAATGTTGGTCTATGAATTTGTTCCCAACTCAACTTTGGAACATCACCTTCATGGAAAAGGTATGCCTACCATGGATTGGCCTTCTAGAATGCGAATTGCAATGGGATCTGCCAAAGGGCTTGCATACCTTCATGAAGATTGTAGCCCTCGCATCATCCATCGTGACATTAAAGCTTCTAACGTTCTTCTTGATGATAGTTTTGAAGCAAAGGTGTCTGATTTTGGACTCGCAAAGTTGACTTCTGATAATAATACACATGTCTCAACTCGTGTCATGGGAACATTCGGGTACTTGGCCCCAGAATACGCATCAAGTGGAAAATTGACAGAGAAGTCTGATGTTTTCTCATTTGGGGTCATGCTATTGGAACTCATAACCGGGAAACGGCCTGTAGATTCGTCAAATGTCATGGAGGACAGTTTAGTGGATTGGGCTCGACCACTCCTGAATAAAGGATTGGAGGATGGCAACTTTGGAGGGTTGGTGGATCCATTTTTGGAAGGCAACTACAATACCCAGGAAATGACAAGAATGGCAGCTTGCGCAGCTGCAAGCATTCGTCATTCGGCTAGGAAGCGTTCAAAAATGAGCCAGATTGTGAGAGCGCTGGAAGGAGATGTGTCATTGGAAGACTTGAAAGAAACGAAACTTGCAGGGAATGGGAATGGGAATGGGAATAGCAGTGCTTTCATTTCTTCATCTGGAAGCTCAGAATATGATACCATGCAATACAATGCTGATATGATTAAGTTCAGACAGGCAATAATGTCGAGCCAAGAATTTAATGACAGTGGTGAGCTTTCCAGTAAGGAGATGGCTTATCATTAG 1767 0.4669 MSSPDKKSAPHNNTPDNATPDDATPDNATPDNATPNNATPDNATPNNATPDNSKGSSSSSSSSSTPSAKETHKALSHEKMSSTEKDNGGTDKAALGAGIGVGFVLLVLIIVCFVWCCRRKKRKQKKYYYASPSKGKGNYYNTGQNSLPNWQQGPGPLGNDHVVRVQQQGMGMQMGMGMQMGMGMAPPSGGGGGGGWGTSHPQMSSGDMSSNYSVGMGSTSPGLSLTLKGGTFTYEELAAATKGFANDQIIGQGGFGYVHKGVLPNGKEVAVKSLKAGSGQGEREFQAEIDIISRVHHRHLVSLVGYCICGGQRMLVYEFVPNSTLEHHLHGKGMPTMDWPSRMRIAMGSAKGLAYLHEDCSPRIIHRDIKASNVLLDDSFEAKVSDFGLAKLTSDNNTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELITGKRPVDSSNVMEDSLVDWARPLLNKGLEDGNFGGLVDPFLEGNYNTQEMTRMAACAAASIRHSARKRSKMSQIVRALEGDVSLEDLKETKLAGNGNGNGNSSAFISSSGSSEYDTMQYNADMIKFRQAIMSSQEFNDSGELSSKEMAYH* 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g2603 588 ProSiteProfiles Protein kinase domain profile. 244 504 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu3g2603 588 SMART serkin_6 244 479 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu3g2603 588 Gene3D Transferase(Phosphotransferase) domain 1 320 532 - -
Pvu3g2603 588 SUPERFAMILY Protein kinase-like (PK-like) 224 516 IPR011009 -
Pvu3g2603 588 ProSitePatterns Protein kinases ATP-binding region signature. 250 272 IPR017441 GO:0005524
Pvu3g2603 588 MobiDBLite consensus disorder prediction 1 70 - -
Pvu3g2603 588 MobiDBLite consensus disorder prediction 1 88 - -
Pvu3g2603 588 ProSitePatterns Serine/Threonine protein kinases active-site signature. 364 376 IPR008271 GO:0004672|GO:0006468
Pvu3g2603 588 Gene3D Phosphorylase Kinase; domain 1 218 319 - -
Pvu3g2603 588 PANTHER RECEPTOR-LIKE KINASE 8 587 - -
Pvu3g2603 588 MobiDBLite consensus disorder prediction 71 86 - -
Pvu3g2603 588 Pfam Protein tyrosine and serine/threonine kinase 247 447 IPR001245 GO:0004672|GO:0006468
Pvu3g2603 588 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 8 587 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g2603 Pvu-Chr3 48083242 48086942 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g2603 86 581 Trihelix Transcription Factor Family AT1G70460 50.297 5.63e-151 449
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Pvu3g2603 PK_Tyr_Ser-Thr 1e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g2603 - - gmx:100805872 767.303
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g0300 2 3035320 3043539 Pvu3g2603 3 48083242 48086942 PCT