Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g2596 ATGAGAGTTCCCTCATCCCCACAGCCCAACACCCATTCTCCCAACCCAAACCTCCTCCTCCACACCCTCCCTAACACCACCAATCCCACCTTCACCTACGAACCCACCTCCGTCCTCGACCTCTGCCGCAGCCCCAGCCCTGAAAAGAAACCAACTGTCCCCAAGCCAGAACCACAACATAACACCAACAACATCACCACCATCACCACCACCAACAACAACAACCTAGACCTGGACGATCATGTCTTGCCAAATTCAGATTGGTGGGAGTCCATCATGAAGGACCTAGCCTTACCCGAAGATTCTCCCACACCCCTCTCCAAGCCTAACAACATCAACCCATGCATCCCTGATTTTCCACCTTCTCATGATCCACCCTTTGATCACCCTCCAGACTTCACCTCGCTGTCAGAAATTTACAACCAAAACCTCCCCTACAACTACACCACCACCAACGCTTTGGACCATTCCTTTCAAGACCTCAACCACCACCACCACAACCCCACCAACAACGTTAACAACAACTGGGACTTCATCGAAGAGCTTATCCGGGCCGCCGATTGCTTCGACAGCAGCCACTTCCAACTTGCTCAAGCCATACTCGAACGCCTCAACAACCGCCTCATTCGCTCACCCATGGCCAAGCCACTCCACCGAGCTGCGTTTCACTTCAAAGATGCTCTCCATTCCATTCTCTCCGGTTCCAACCGTGCCGGTTCCAATCGCCTCTCCTCCATGGCCGAGATTGTTCAGACCATCAAAACGTTCAAGGCCTTTTCGGGAATCTCTCCCATCCCAATGTTCTCTATCTTCACCACCAACCAGGCCTTGCTCGAAACCCTAAACGGATCCTCCTTCGTCCACGTCATCGATTTCGAGATCGGGCTCGGAATCCAATACGCCTCTCTCATGAAAGAGATCGCAGAGAAGGCTGCCGGAGCTTCGCCACTCCTCCGCATCACCGCCGTCGTGCCAGAGGAGTACGCCGTCGAGAGCCGCCTCGTCCGCGAGAATCTCAACCAGTTTGCGCATGACCTCGGGATCCGCGCACAGGTGGACTTTGTCCCGCTTCGGACCTTTGAGACGGTGTCGTTCAAGGCAGTAAGGTTCGTCGACGGCGAGAAGATTGCGGTGCTGCTGTCACCGTCGATCTTCTGCCGCCTCGGATCCGGCGGAGCCAACGTCGGCGCGTTCCTCGCTGACGTGAGGAGGATGGCTCCCGGAGTGGTGGTGTTTGTGGACGGCGAGGGGTGGACGGAGGCCACAGCTGCCGCGTCTTTCCGGCGCGGCGTGGTGAACAGCTTGGAGTTTTACTCGATGATGCTCGACTCGCTGGATGCGTCTGTGGCGGCGGGAGGAGGCGGCGAGTGGGTGAGGAGGATCGAAATGCTTCTGCTGCGGCCTAAGATCTTCGCAGCGGTGGAAAGCGCAAGGAGGAGGGCGCCACCGTGGAGGGAGGCATTTTACGGCGCCGGAATGAGGCCGGTGCAGCTGAGCCAGTTCGCCGATTATCAAGCGGAGTGTTTGCTGGCGAAGGTGCAAATCAGAGGGTTCCACGTGGACAAACGGCATGCTGAGTTGGTGCTGTGCTGGCACGAACGAGCCATGGTTGCGACGTCAGCTTGGCGGTGCTAG 1635 0.5713 MRVPSSPQPNTHSPNPNLLLHTLPNTTNPTFTYEPTSVLDLCRSPSPEKKPTVPKPEPQHNTNNITTITTTNNNNLDLDDHVLPNSDWWESIMKDLALPEDSPTPLSKPNNINPCIPDFPPSHDPPFDHPPDFTSLSEIYNQNLPYNYTTTNALDHSFQDLNHHHHNPTNNVNNNWDFIEELIRAADCFDSSHFQLAQAILERLNNRLIRSPMAKPLHRAAFHFKDALHSILSGSNRAGSNRLSSMAEIVQTIKTFKAFSGISPIPMFSIFTTNQALLETLNGSSFVHVIDFEIGLGIQYASLMKEIAEKAAGASPLLRITAVVPEEYAVESRLVRENLNQFAHDLGIRAQVDFVPLRTFETVSFKAVRFVDGEKIAVLLSPSIFCRLGSGGANVGAFLADVRRMAPGVVVFVDGEGWTEATAAASFRRGVVNSLEFYSMMLDSLDASVAAGGGGEWVRRIEMLLLRPKIFAAVESARRRAPPWREAFYGAGMRPVQLSQFADYQAECLLAKVQIRGFHVDKRHAELVLCWHERAMVATSAWRC* 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g2596 544 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 6 543 IPR005202 -
Pvu3g2596 544 PANTHER SCARECROW-LIKE PROTEIN 15 6 543 - -
Pvu3g2596 544 MobiDBLite consensus disorder prediction 43 63 - -
Pvu3g2596 544 MobiDBLite consensus disorder prediction 1 29 - -
Pvu3g2596 544 Pfam GRAS domain family 179 543 IPR005202 -
Pvu3g2596 544 ProSiteProfiles GRAS family profile. 169 543 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g2596 Pvu-Chr3 47996213 47997847 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g2596 53 543 GRAS Transcription Factor Family AT4G36710 50.969 9.15e-159 460
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Pvu3g2596 GRAS 7.3e-84 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g2596 - - gmx:100785004 869.766
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g2596 3 47996213 47997847 Pvu3g2596 3 47996213 47997847 ECH
Pvu2g0283 2 2913459 2915012 Pvu3g2596 3 47996213 47997847 PCT