Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g2581 ATGACCCCATGTGGCGCGTGCAAGTATCAACGGCGAAGGTGCAGGGCGGATTGCCTTATGGCGCCGTATTTTCCGGCAGAGAGCATTCAGCGGTTCGCGTACATTCACCATGTGTTCGGCGGGGGCAACGTGAGTAACATTTTGAAGTCAACGAAGCTGGAGTTGCGGAAGTGGACGGCGAGGGCACTGACGTACCAAGCGGAGGCGCGTGTGAGAGACCCGGTGCATGGGTGCGTTGGGGTGATATGCGAGCAGGAGGAGAGTCTTCGAATCCTGAAAGAGAAGCTAGAGAAGGCGAAAAGGGAAGTGGCCCAAAACGTGGGCCCAGAGGTTATGCAAAAGATGATTGAGCAGTGTTCCTCCGATTCTCATGCGAATATGGTGGACCTTGAGGCTCCTCTCGCAATCACGGTTGATGATGCCGATCTTTCTTCATGGGATCCTTTTTCGGCTTGGGAACCAGCTTTTTCGCGACTGCAGCCACCTCAAGGTGGCGACGCTAAGGGCGAGACTATTGTTCCTCCTTCTTGA 531 0.548 MTPCGACKYQRRRCRADCLMAPYFPAESIQRFAYIHHVFGGGNVSNILKSTKLELRKWTARALTYQAEARVRDPVHGCVGVICEQEESLRILKEKLEKAKREVAQNVGPEVMQKMIEQCSSDSHANMVDLEAPLAITVDDADLSSWDPFSAWEPAFSRLQPPQGGDAKGETIVPPS* 177
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g2581 176 PANTHER LOB DOMAIN-CONTAINING PROTEIN 32-RELATED 2 127 - -
Pvu3g2581 176 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 2 127 - -
Pvu3g2581 176 MobiDBLite consensus disorder prediction 155 176 - -
Pvu3g2581 176 ProSiteProfiles LOB domain profile. 2 103 IPR004883 -
Pvu3g2581 176 Coils Coil 82 106 - -
Pvu3g2581 176 Pfam Lateral organ boundaries (LOB) domain 3 100 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g2581 Pvu-Chr3 47782826 47783356 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g2581 2 117 AS2 family AT5G66870 43.966 2.45e-34 121
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Pvu3g2581 LOB 1e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g2581 - - gmx:102663028 184.882