Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g2546 ATGGAAGAGATGACAAAAAGAGTTGGCTTTGGAAGGATCAATGGTCCCTTTGGTGTTCCTGAAAAGCCAGAATTCAGTGTTGGATTGGATGCAGCATTGAGCAAGGTGAAGATGGAGCTTCTCAATGGACCTAAGTCCATCTTTGTATTGACTGGTTTTGGAGGATCTGGAAAAACCACTCTGGCTACACTGCTCTGTTGGGATGAACAGATCAAGAGTAAATTCAGGGAAAATATATTTTTTGTGACCTTTTCCAAAACGTCAAAGTTGAAGATCATCGTGGAAAGACTATTTGAACATCTTGGATATGAAGTGCCTAGGTTTGAAAACGATGAAGAGGCAATTAATCAATTAGGACTTTTACTAAGGAAATTGAAGGGAAGAGTGTTGATGGTTCTGGATGATGTTTGGCCTGACTCAGAAGATCTGGTGGAGAAATTTAAATTCCATTTAGCAGATTATAAAATTTTGGTGACTTCAAGGGTTGCATTTCCAAGATTTGGCACCCCATGTGTCTTAAAACCACTCCTTCACCAACATGCAATCACCCTTTTCCGTTACTATGCTCTCTTGGATAGCAACAGTTTAAATATTCCACACGAAGATGTAGTCCAAAAGGTTGTGAAAAGTTGCATGGGTTTACCACTTGCCATTAAAGTGATTGGTAGGTCACTCAGTCATGGACCAAATGAGTTATGGCAAAAGATGGTGTTGGAATTGTCACATGGTAATTCCATACTTAATTGTAACACTGAATTGCTAACCTACCTCCCTAAGATCTTAGATGTACTGGAAGATGATAGAGTCATCAAAGAGTGCTTCATGGACCTAGGCTTATTTCCTCAAGACCAAAGAATTCCTGTTACTGCTCTCATTGATATGTGGACAGAGTTGTATGGACTAGACAATGACGGCATAGAAGCAATGGAAATTATCAACAAATTACACTCCATGAATCTGGCTAATGTCTGCATAGCAAGGAAAAATACAAGTGACACAGACAATTATTACTACAATAACCACTTCATCGTCCTTCATGATCTTCTAAGAGAGCTGGCAATTTATGGAAGCACCCTGGAACCAATTGAAGAGAGAAAAAGACTGATTATTGGCACCAACGAAAATGAAAGTGAATGGGGGCTTGATGAGAAGCAACGAGGCATGGTGACCTGCATATTGTCAAATTATGAAAAGGGTTCTTCATATTGGTCACACATACATTCAGCTCAAGCAAAGGTTCTAATTTTAAATCTCCGAGTTAATCAGTACTCCTTTCCAGAATCCATGCAGAAAATGAGCAAACTAAAAGCTCTGATAATCACAAATTACAATTTCCATCCTTCTGAGCTGACCAATTTTGAACTACTTGCCCTTTTATCCAACCTGAAAAGAATTAGATTAGAGAGGATTGCTGTTCTTTCATTTGTCACACTGAAGGCTCTTAGGAAACTATCCATATACAACACGAGCCATGCTTTTCAAGATGGTATAATTTCAGATGCATTTCCAAATCTAGTGGATTTGAACATTGACTATTGCAAAGATATGGTGGTGTTGCCAAGTGGTTTGTGTGATATTATCCCACTGAAGAAGCTCAGTGTTACTAATTGCCACAAGCTCTTAGCACTGCCTCAAGAAATTGGAAAGTTGGTGCATTTGGAACTGCTAAGGCTCAGTTCTTGTAGCGATTTGGAAAGGTTACCAGATTCTATTGGAAGGGTTCAAAATCTAGCACATCTTGACATCTCAAACTGCATAAGCCTTTGTAATTTACCAGAGGACGTTGGAAAATTGTGTAATCTAAGAAAGGTGAGCATGATAAATTGTGCAAGGTGTGAATTGCCATACTCAGTAGTGAATCTTGTGAATTTGAAGATGGTGAGTTGCGATGAAGAGACATCTGCTTCATGGGAAGGGTTCAAAGCCATGCTTCCGAATCTACTGATAGAGGTGCCTCAAGTTGATGTTAACTTAAACTGGCTTCATTCAGTTAGCTCCTAA 2001 0.3923 MEEMTKRVGFGRINGPFGVPEKPEFSVGLDAALSKVKMELLNGPKSIFVLTGFGGSGKTTLATLLCWDEQIKSKFRENIFFVTFSKTSKLKIIVERLFEHLGYEVPRFENDEEAINQLGLLLRKLKGRVLMVLDDVWPDSEDLVEKFKFHLADYKILVTSRVAFPRFGTPCVLKPLLHQHAITLFRYYALLDSNSLNIPHEDVVQKVVKSCMGLPLAIKVIGRSLSHGPNELWQKMVLELSHGNSILNCNTELLTYLPKILDVLEDDRVIKECFMDLGLFPQDQRIPVTALIDMWTELYGLDNDGIEAMEIINKLHSMNLANVCIARKNTSDTDNYYYNNHFIVLHDLLRELAIYGSTLEPIEERKRLIIGTNENESEWGLDEKQRGMVTCILSNYEKGSSYWSHIHSAQAKVLILNLRVNQYSFPESMQKMSKLKALIITNYNFHPSELTNFELLALLSNLKRIRLERIAVLSFVTLKALRKLSIYNTSHAFQDGIISDAFPNLVDLNIDYCKDMVVLPSGLCDIIPLKKLSVTNCHKLLALPQEIGKLVHLELLRLSSCSDLERLPDSIGRVQNLAHLDISNCISLCNLPEDVGKLCNLRKVSMINCARCELPYSVVNLVNLKMVSCDEETSASWEGFKAMLPNLLIEVPQVDVNLNWLHSVSS* 667
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g2546 666 PRINTS Disease resistance protein signature 47 62 - -
Pvu3g2546 666 PRINTS Disease resistance protein signature 123 137 - -
Pvu3g2546 666 PRINTS Disease resistance protein signature 211 225 - -
Pvu3g2546 666 PRINTS Disease resistance protein signature 572 588 - -
Pvu3g2546 666 SUPERFAMILY L domain-like 412 628 - -
Pvu3g2546 666 Gene3D Ribonuclease Inhibitor 374 644 IPR032675 -
Pvu3g2546 666 Pfam NB-ARC domain 32 241 IPR002182 GO:0043531
Pvu3g2546 666 PANTHER RESISTANCE PROTEIN ADR1, PUTATIVE-RELATED 15 662 - -
Pvu3g2546 666 PANTHER PLANT BROAD-SPECTRUM MILDEW RESISTANCE PROTEIN RPW8 15 662 IPR039203 GO:0050832
Pvu3g2546 666 Gene3D - 260 353 IPR036388 -
Pvu3g2546 666 Gene3D - 176 253 IPR042197 -
Pvu3g2546 666 Gene3D - 12 164 IPR027417 -
Pvu3g2546 666 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 17 277 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g2546 Pvu-Chr3 47296165 47300076 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g2546 425 611 WRKY Transcription Factor Family AT4G12020 28.037 5.03e-09 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g2546 - - vun:114175480 1078.16
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g2546 3 47296165 47300076 Pvu3g2546 3 47296165 47300076 ECH