Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g2544 ATGAAGCGTCCTTTTGGTGTTCCTGAAAAGCATGAATTCACTGTTGGATTGGATGTACCATTTAGCAAGTTGAAGATGGAACTTCTCCATGAATCTGTGTCCATCATTGTGTTGACTGGTTTTGGAGGATCTGGGAAAACCACTCTGGCTACAAAACTTTGTTGGGACCAACAAGTCATGAGTAAATTCAAGGGAAATATATTATTCATCACCCTCTCTAAGGCTCCTAAATTGAAGATTATTGTAGAAAGATTATTTGAACATAGTGGAGACCAAGTGCCAGAGTTTCAAAGTGATGAAGATGCAGTTTATCAATTGGGACTTTTGCTAAGGAAAACTGATGCAAGTCCTATTCTGTTGGTTCTGGATGATGTCTGGCCTGGCTCAGAAGCCATAGTTGAGAAATTTAAAGTTCAGATATCAAATTATAAAATTCTGGTTACTTCAAGAGTTGCATTTCCTAGATTTGGCACTCCATTCATCTTAAAACCGCTTGCTCATGAAGATGCAATAACCCTTTTTCGTCACCATGCTCTCTTGAAAAATAGCAGTTCAATTATTCCTGACGAAGATCTTGTCCAAAAGGTGGTGAGTCATTGCAAGGGTTTACCGCTTGCCATTAAAGTTATTGGTAGATCCCTAAGTAATCGACCTTATGAATTTTGGCAAAAGATGGTGGAGGAATTGTCTCAAGGTCATTCGATACTTGATTCCAACATTGATTTACTTACTTCCCTACAAAAGATCTTAGATGTCTTGGAAGATAATTCCATCATCAAAGAGTGCTTCATGGACTTGGCTTTATTTCCTGAAGACCAAAGAATTCCTCTTGCTGCTCTCGTTGATATCTGGGCAGAGTTGTATGGACTAGATAATAATGGCATAGAAGTAATGGCCATTGTCAACAAATTGGACTCCATGAATTTGGCTAATGTCTTAGTAACAAGGAAAAATACAAATGACACAGACAGTTACTACTACAATAGCCGTTTTGTCATCCTTCATGATATTCTAAGAGACTTGGCCATTTATGAAAGCACTCAAGAACAAACTGAACAGAGAAAAAGACTGATGATTGACATGGATGAAAATAAACCTGAAGGGTGTCTTATTGAACCAAAACCCCAACAGATTCGTACTCGGACTTTGTCTATATCAACTGATGAAACTTTCACTTCATATTGGTCCAACCTACTACCAGTTCAAGCTGAGATTCTGGTTTTAAACCTACGAACTAATCAGTACTCCTTTCCAAAGTTACTGAAAAAAATGAGTATACTAAAAGTTCTGATAGTCATAAAGTATGGTTTCCGTCCTTGTGAAATGATCAATTTTGAGCTACTTGGCTCACTAAACAACCTAAAACGAATCAGGCTAGAGAAGATTTGTATTCCTTCCTTTGTCATAATAAAGAATCTTAAAAAGTTATCCCTCTACATGTGTGATACAAGACAGGCTTTCGGAAACAGTAACATGCTAATTTCAGATGCTTTTCCAAATCTAGAGGACTTGAATATTGACTACAGCAAAGATATGATTGGATTGCCTAAGGGGCTGTGTGATATCACCTCCTTGAAGATGCTCAGTATTAGTAATTGCCATAAGCTTTCTGAATTGCCTCAAGAAATTGGAAACTTGGTGAATTTGAAACTCCTAAGGCTGAGTTCTTGTACTGATTTGGAAGGGATACCAAATTCTATAGTAAGACTTTCGAATCTAAGACATATGGACATCTCAAACTGCATTGGCCTTCGTAATTTACCAGAGGACTTTGGCAATCTATGTAATCTTGGAAATCTGTACATGACAAGTTGTGCAAGGTGTGAATTGCCACCCTCAATCGTAAATCTTAAGAATTTAAGGAAAGTGGTGTGTGATGAAGAGACGGCTGCTTCATGGGAACCTTTCAAGCACATGCTTCCCTATCTAAATATAGATATTCCTCAACTTGATGTTAACTTGAATTGGCTTCATGCAATTCACTCCTAA 1989 0.3766 MKRPFGVPEKHEFTVGLDVPFSKLKMELLHESVSIIVLTGFGGSGKTTLATKLCWDQQVMSKFKGNILFITLSKAPKLKIIVERLFEHSGDQVPEFQSDEDAVYQLGLLLRKTDASPILLVLDDVWPGSEAIVEKFKVQISNYKILVTSRVAFPRFGTPFILKPLAHEDAITLFRHHALLKNSSSIIPDEDLVQKVVSHCKGLPLAIKVIGRSLSNRPYEFWQKMVEELSQGHSILDSNIDLLTSLQKILDVLEDNSIIKECFMDLALFPEDQRIPLAALVDIWAELYGLDNNGIEVMAIVNKLDSMNLANVLVTRKNTNDTDSYYYNSRFVILHDILRDLAIYESTQEQTEQRKRLMIDMDENKPEGCLIEPKPQQIRTRTLSISTDETFTSYWSNLLPVQAEILVLNLRTNQYSFPKLLKKMSILKVLIVIKYGFRPCEMINFELLGSLNNLKRIRLEKICIPSFVIIKNLKKLSLYMCDTRQAFGNSNMLISDAFPNLEDLNIDYSKDMIGLPKGLCDITSLKMLSISNCHKLSELPQEIGNLVNLKLLRLSSCTDLEGIPNSIVRLSNLRHMDISNCIGLRNLPEDFGNLCNLGNLYMTSCARCELPPSIVNLKNLRKVVCDEETAASWEPFKHMLPYLNIDIPQLDVNLNWLHAIHS* 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g2544 662 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 4 266 IPR027417 -
Pvu3g2544 662 SUPERFAMILY L domain-like 334 625 - -
Pvu3g2544 662 Gene3D Ribonuclease Inhibitor 364 655 IPR032675 -
Pvu3g2544 662 Gene3D - 165 245 IPR042197 -
Pvu3g2544 662 Gene3D - 2 153 IPR027417 -
Pvu3g2544 662 Pfam NB-ARC domain 23 246 IPR002182 GO:0043531
Pvu3g2544 662 Gene3D - 246 346 IPR036388 -
Pvu3g2544 662 PANTHER PLANT BROAD-SPECTRUM MILDEW RESISTANCE PROTEIN RPW8 12 648 IPR039203 GO:0050832
Pvu3g2544 662 PRINTS Disease resistance protein signature 35 50 - -
Pvu3g2544 662 PRINTS Disease resistance protein signature 112 126 - -
Pvu3g2544 662 PRINTS Disease resistance protein signature 200 214 - -
Pvu3g2544 662 PRINTS Disease resistance protein signature 544 560 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g2544 Pvu-Chr3 47275848 47278964 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g2544 498 621 Receptor kinase-like Gene Family AT1G28440 37.008 2.88e-10 61.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g2544 - - gmx:100793054 1056.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g2544 3 47275848 47278964 Pvu3g2544 3 47275848 47278964 ECH
Pvu2g0221 2 2360721 2366207 Pvu3g2544 3 47275848 47278964 PCT