Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g2536 ATGCGGTGGTTACCCACGCTTTCCTTCGCGCCTTCCAGTTCCTCCTCGTCTTCCTCCGCAACTGCCACCGACCACCGCCGGAAGGCCAAGCTATTCGGTAATTCGGGCAAGAAGCGCGCCTGCCACGTCGTCGAGAACGATGTCAGGTCGCTTGACGAAGATTCTCCCTTCCCTTCCCCCGGCACGCCTCAGCCCTTACCCCTGCCGGAGCTCGCCGCCTCCCCGGCCCTAGTCCGTAACAAAGACGGCGAGCGCCGTCTTCCTTCGCCCAAGGATGCTGCTACAGCCACCGCCACCACCGGCTTTCAGATGCGGAGTGTTTTTGCTAGCCAAGACACGAGAAGGAACATGGAACAGGCTGAAACTAGGTCATCGAGAATGGTGCATCAAGATGCGAGTGGTTGTTGTGAGAGTGCTCGAGATAACAGTAATACTAATAATAGTAACTTGGTGAGCGTCCCTCATAGGAGCACTATTTCAGGTAGTCCCTTTGCAAGTCCTTTAATGAGTCCACAGAATACAAAAAATGGTGAATTTGTGCCATATTATTATGCGAGTCCCAAAGGAAATCAGTTCTGGTCTGCACCAGAAATGTCTATCTGTGAAACAGGGTTGCTACCTCCTGCCTTCTTTGATCTATCCGTGTCGGGCACAGAAACTTCTCCCTCTCCCACCTCCCATCAAAGTCCACAGAGGAAAAGTCCCCAGCAACACGGCAGAACAATGAGTGGACCTCCATCCCCTATACATTCCAAGTTATCACTTGAACTCTCAATGGTGCGCCGTGAAAGTTGTGCTCCTCCTGTCAGTGTTCACCCCTTGCCCCTGCCTCCCGGGGCTGCCCTGCCCTCTCCACCAGCGGTTGGTACATTTTCCCATGTTAGGTCAGAATCATTGCCAATGAAAAACCAATGGAAGAAAGGGAAACTTATTGGGCGTGGGACATTTGGAAGTGTTTATGTTGCAACCAATAGGGAAACCGGGGCATTATGTGCGATGAAGGAAGTAGAAATATTTCCTGATGATCCAAAATCTGCCGAGTGTATAAAACAGTTAGAGCAGGAAATTAAAGTTCTTAGCCAGCTGCAGCATTCAAACATCGTGCAGTATTATGGCAGTGAAATAGTTAATGACCGATTTTATATTTATCTGGAATATGTTCATCCTGGTTCAATTAATAAATACGTCCGTGAGCATTGTGGTGCCATAACAGAATCTGTCATTCGAAATTTCACTCGACATATTCTATCAGGGTTGGCTTATTTACATAACAAAAAAACAATTCATAGGGACATCAAAGGGGCTAACTTGCTTGTTGACTCTGCTGGAGTTGTTAAGCTTGCTGATTTTGGGATGGCTAAGCATCTAACGGGGTTCGAAGGTAATCTTTCTTTGAGGGGAAGCCCGTATTGGATGGCTCCAGAGCTTTTGCAGGCTGTGATGCAAAAGGATAACAGTCCTGATCTTGCTTTTGCTAGTGATATTTGGAGTCTGGGTTGTACCATCATTGAAATGTTCACAGGGAAGCCTCCTTGGAGTGAATATGAAGGAGCCGCAGCTCTGTTTAAGGTTATGAAGGAAACCCCTCCTATTCCTGAAACATTGTCACCGGAAGGTAAAGATTTCTTGAGGTGCTGCTTTAAAAGAAATCCAGCAGAACGGCCAGCAGCTGCAGTTTTACTAGAACATCGATTTTTGAAAAACTCTCAACAGCCTGATGTTTTATCTCCCACTCAGCTCTATAATGGAACAGGCCTCATGGACAAACCACTCAGTCCCATTCAAAAATCTGAATATAAACTTGATCGGTCGTCAATTTCCTGTGCAAACATTGCCAAGGGTAAAGCAGCTGACAGGCGTGGATTTCCCATTCCTTCCTTGGATATTCTTCCTGCATTCTTGGACCAATAA 1911 0.472 MRWLPTLSFAPSSSSSSSSATATDHRRKAKLFGNSGKKRACHVVENDVRSLDEDSPFPSPGTPQPLPLPELAASPALVRNKDGERRLPSPKDAATATATTGFQMRSVFASQDTRRNMEQAETRSSRMVHQDASGCCESARDNSNTNNSNLVSVPHRSTISGSPFASPLMSPQNTKNGEFVPYYYASPKGNQFWSAPEMSICETGLLPPAFFDLSVSGTETSPSPTSHQSPQRKSPQQHGRTMSGPPSPIHSKLSLELSMVRRESCAPPVSVHPLPLPPGAALPSPPAVGTFSHVRSESLPMKNQWKKGKLIGRGTFGSVYVATNRETGALCAMKEVEIFPDDPKSAECIKQLEQEIKVLSQLQHSNIVQYYGSEIVNDRFYIYLEYVHPGSINKYVREHCGAITESVIRNFTRHILSGLAYLHNKKTIHRDIKGANLLVDSAGVVKLADFGMAKHLTGFEGNLSLRGSPYWMAPELLQAVMQKDNSPDLAFASDIWSLGCTIIEMFTGKPPWSEYEGAAALFKVMKETPPIPETLSPEGKDFLRCCFKRNPAERPAAAVLLEHRFLKNSQQPDVLSPTQLYNGTGLMDKPLSPIQKSEYKLDRSSISCANIAKGKAADRRGFPIPSLDILPAFLDQ* 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g2536 636 ProSitePatterns Protein kinases ATP-binding region signature. 311 334 IPR017441 GO:0005524
Pvu3g2536 636 Gene3D Transferase(Phosphotransferase) domain 1 301 584 - -
Pvu3g2536 636 PRINTS Tyrosine kinase catalytic domain signature 384 397 IPR001245 GO:0004672|GO:0006468
Pvu3g2536 636 PRINTS Tyrosine kinase catalytic domain signature 421 439 IPR001245 GO:0004672|GO:0006468
Pvu3g2536 636 PRINTS Tyrosine kinase catalytic domain signature 493 515 IPR001245 GO:0004672|GO:0006468
Pvu3g2536 636 PRINTS Tyrosine kinase catalytic domain signature 535 557 IPR001245 GO:0004672|GO:0006468
Pvu3g2536 636 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 1 613 - -
Pvu3g2536 636 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 5 1 613 - -
Pvu3g2536 636 SMART serkin_6 305 566 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu3g2536 636 MobiDBLite consensus disorder prediction 1 70 - -
Pvu3g2536 636 MobiDBLite consensus disorder prediction 212 251 - -
Pvu3g2536 636 Pfam Protein kinase domain 306 566 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu3g2536 636 SUPERFAMILY Protein kinase-like (PK-like) 296 590 IPR011009 -
Pvu3g2536 636 MobiDBLite consensus disorder prediction 7 22 - -
Pvu3g2536 636 MobiDBLite consensus disorder prediction 214 248 - -
Pvu3g2536 636 ProSiteProfiles Protein kinase domain profile. 305 566 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g2536 Pvu-Chr3 47205695 47210960 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g2536 123 624 MAP Kinase Kinase Kinase AT5G66850 58.425 0.0 610
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Pvu3g2536 Pkinase 2.8e-66 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g2536 - - gmx:100790701 967.607
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g0215 2 2290030 2294494 Pvu3g2536 3 47205695 47210960 PCT