Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g2531 ATGGGTCTCTGCGGCTCAAAGCCTCGTGCGAATCCCACACTCTCTTCATCTCCCAATTCCAACACCCACTTCACAGACACCAATGCCAATGAACAATTGCCGAAAAATCCTATTCCTACTCCAAAAAAATCTCCCCTTTTCCCGTTCTACACTCCGAGCCCGGCCCACCACTTTTTCTCCGCCAAGTCTCCGGCACCAGCGACTCCCCGGCGGTTCTTCAAGCCTCCGTCTCCAGCGAAGCACATTCGGGCCGTGCTGGCCCGTCGTCATGGGTCTGTTAAGCCCAACGAAGCTACCATCCCAGAAGATGAAGTGGTTGCTCTTGACAAGAACTTCGGATTCTCGAAACAGTTTGAGCAAAAGTTTGAGGTTGGGGGCGAGGTTGGACGAGGACACTTTGGTTACACTTGTTCTGCGAAGTTCCTTAAGGGCCAACTCAAAGGCCAACACGTCGCCGTCAAGGTCATCCCTAAAGCCAAGATGACAACTGCAATTGCAATTGAGGATGTAAGGAGGGAGGTGAAGATATTGAGGGCCTTGACTGGACATAAAAATCTGATTCAGTTCCACGATGCGTATGAGGATAATGACAATGTCTACATAGTAATGGAGTTGTGCGAAGGTGGGGAGCTTTTGGACAGAATATTGTCGAGAGGAGGGAAATACACGGAGGAAGATGCAAAAGCTGTCATCATACAAATACTAAATGTTGTTGCGTTTTGCCATCTACAGGGTGTTGTGCATCGCGATCTCAAACCAGAGAATTTCTTATTCACATCAAAAGAAGAAAACTCTGAGCTGAAGGCCATTGACTTTGGATTGTCGGATTTTGTCAAACCAGATGAAAGGCTTAATGATATTGTTGGTAGTGCATACTATGTGGCTCCTGAAGTTTTGCATAGAGCTTATAGTACAGAGGCTGATGTCTGGAGTGTTGGTGTGATTGCGTATATTTTACTATGTGGCAGTCGTCCATTTTGGGCACGGACTGAATCTGGGATCTTCCGTGCCGTATTGAGAGCTACTCCAAGTTTTGATGAACCTCCATGGCCTTCTCTATCAGATGAAGCAAAGGATTTTGTTAAGAGACTTCTAAATAAAGATCCAAGGAAAAGAATGACTGCAGCGCAGGCATTGAGTCATCCGTGGATTAAAAGTTATAAGGACGTAAAAGTACCTTTGGATATTCTAGTGTTCAAGCTCATGAAGATATACATGCGTTCCTCCTCTCTACGAAAAGCAGCTTTAAGGGCTTTGTCTAAGACATTAGCTACTGAAGAGCTGCAGCATTTGAAGGAGCAGTTTGCACTTTTAGAGCCAAACAAAACCAACACTATTAGCTTGGAAAATATCAAAGCGGCCTTGATGAAAAATGCAACAGATGCTATGAAGGAATCACGCATTCCAGATTTTCTGGCATCA 1422 0.4536 MGLCGSKPRANPTLSSSPNSNTHFTDTNANEQLPKNPIPTPKKSPLFPFYTPSPAHHFFSAKSPAPATPRRFFKPPSPAKHIRAVLARRHGSVKPNEATIPEDEVVALDKNFGFSKQFEQKFEVGGEVGRGHFGYTCSAKFLKGQLKGQHVAVKVIPKAKMTTAIAIEDVRREVKILRALTGHKNLIQFHDAYEDNDNVYIVMELCEGGELLDRILSRGGKYTEEDAKAVIIQILNVVAFCHLQGVVHRDLKPENFLFTSKEENSELKAIDFGLSDFVKPDERLNDIVGSAYYVAPEVLHRAYSTEADVWSVGVIAYILLCGSRPFWARTESGIFRAVLRATPSFDEPPWPSLSDEAKDFVKRLLNKDPRKRMTAAQALSHPWIKSYKDVKVPLDILVFKLMKIYMRSSSLRKAALRALSKTLATEELQHLKEQFALLEPNKTNTISLENIKAALMKNATDAMKESRIPDFLAS 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g2531 474 Gene3D Transferase(Phosphotransferase) domain 1 211 395 - -
Pvu3g2531 474 ProSiteProfiles EF-hand calcium-binding domain profile. 426 461 IPR002048 GO:0005509
Pvu3g2531 474 Gene3D - 402 423 - -
Pvu3g2531 474 ProSitePatterns Serine/Threonine protein kinases active-site signature. 246 258 IPR008271 GO:0004672|GO:0006468
Pvu3g2531 474 MobiDBLite consensus disorder prediction 9 37 - -
Pvu3g2531 474 Gene3D Phosphorylase Kinase; domain 1 115 210 - -
Pvu3g2531 474 SUPERFAMILY Protein kinase-like (PK-like) 120 412 IPR011009 -
Pvu3g2531 474 MobiDBLite consensus disorder prediction 1 46 - -
Pvu3g2531 474 PANTHER CALMODULIN-DOMAIN KINASE CDPK PROTEIN 33 474 - -
Pvu3g2531 474 CDD STKc_CAMK 121 383 - -
Pvu3g2531 474 Pfam Protein kinase domain 123 384 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu3g2531 474 PANTHER SERINE/THREONINE-PROTEIN KINASE 33 474 - -
Pvu3g2531 474 Gene3D - 424 463 - -
Pvu3g2531 474 ProSiteProfiles Protein kinase domain profile. 122 384 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu3g2531 474 SMART serkin_6 122 384 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu3g2531 474 ProSitePatterns Protein kinases ATP-binding region signature. 128 154 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g2531 Pvu-Chr3 47172141 47175624 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g2531 1 473 EF-hand Containing Proteins AT3G50530 70.566 0.0 730
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Pvu3g2531 Pkinase 1.9e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g2531 K00924 - gmx:100803313 868.226
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g2531 3 47172141 47175624 Pvu2g0212 2 2268335 2273883 PCT