Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g2517 ATGGAGATGGCTCACGTGAAGACACGAGCTCGAACTGCATTGGGCGTTGGAGCTTCTGCGACTTCACCGAAGAGAAAGAAAATCGCCATTAACAACAGCAACAACATCTCACCGTCCTCCTTCGTTCAACTCAAGAGTTTGAGTAATACAGCGGCGTCGGAGACGGAGGAACGCTGTTCCGGCGACTCTCCGGCGTCGTGTTGCTCCAGCAACGGATCATTCGACGGAAACCGAATCATCAAATTCTCAGATCTGGAGGTAGAGAACGCTCAAGTTGAGACGTCGACGTGCAACTGCCGTGAACAACAAATAAGGAGAGAGATGAGTCTCTCGAGCGAGCTTCGAATTCCGAATTCGCAGGAAGTGGATTCAGCGGAGAAGAAGACAACGATAACCAAATCTCGCTGCTGCGTTTCATCAGCGCTGCAGAAAAGGCCAACGGATTCGGAGCTCGAAGAATTCTTCGCCGCCGCGGAGAAGGACATTCATAAACGCTTCTCAGAAAAGTATAATTATGATATCGTGAAGGACGTGCCCTTGGAAGGACGATACGAGTGGGTGAAATTGAAGCCATAA 576 0.5 MEMAHVKTRARTALGVGASATSPKRKKIAINNSNNISPSSFVQLKSLSNTAASETEERCSGDSPASCCSSNGSFDGNRIIKFSDLEVENAQVETSTCNCREQQIRREMSLSSELRIPNSQEVDSAEKKTTITKSRCCVSSALQKRPTDSELEEFFAAAEKDIHKRFSEKYNYDIVKDVPLEGRYEWVKLKP* 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g2517 191 PANTHER CYCLIN-DEPENDENT KINASE INHIBITOR 7 3 191 - -
Pvu3g2517 191 PIRSF CKI_KRP_plant 1 191 IPR044275 GO:0004861|GO:0045736|GO:0051726
Pvu3g2517 191 Pfam Cyclin-dependent kinase inhibitor 146 189 IPR003175 GO:0004861|GO:0005634|GO:0051726
Pvu3g2517 191 MobiDBLite consensus disorder prediction 1 38 - -
Pvu3g2517 191 PANTHER CYCLIN-DEPENDENT KINASE INHIBITOR 4-RELATED 3 191 IPR044275 GO:0004861|GO:0045736|GO:0051726
Pvu3g2517 191 Gene3D p27 133 191 IPR044898 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g2517 Pvu-Chr3 46982527 46984560 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g2517 80 191 Core Cell Cycle Gene Families AT1G49620 45.299 6.00e-21 84.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g2517 - - vra:106765801 283.493
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g0199 2 2146852 2148906 Pvu3g2517 3 46982527 46984560 ECH
Pvu3g2517 3 46982527 46984560 Pvu3g2517 3 46982527 46984560 ECH
Pvu2g0199 2 2146852 2148906 Pvu3g2517 3 46982527 46984560 PCT