Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g2494 ATGGCTAATGAAGAGGAACCCAAAAACCATGTCTTCGGCATCAAAGATCTCTCTCATAAGACTCTCCTTCAGAGCGATGCACTCTATCAGTACATACTTGACACCAGCGTTTATCCAAGAGAGCACGAGTGCTTGAAGGAGCTCCGCGAGATGACAGAAAAACATCCTCGGAACCTCATGGCTACACCACCAGACGAAGGGCAACTTCTGAGCATGCTTATTAAGCTCATTAATGCCAAGAACACCTTGGAAATTGGTGTATACACTGGTTATTCTCTTCTCTCCACTGCCCTGGCTCTTCCCCCTGATGGAAAGATATTGGCTTTGGACGTGAACCGCGAATACTATGAATTGGGTTTGCCCATCATTGAAAAAGCTGGTGTGGCTCATAAGATCGACTTCAAAGAAGGCCCTGCTCTTCCTTTTCTTGACGAGCTGCTTAAAGATGAAAACAAGAAGGGAACGTTCGATTTCGTTTTCGTGGATGCTGATAAGAACAATTACTTGAACTATCACAAGAGGGTAATTGATCTGGTGAAGGTTGGAGGGCTGATCGGATACGACAACACCCTATGGGCTGGATCTGTGGCGGCGTCGCCTGATGCACCATTTATGGATTACATTAAGCCTCTTCGCGGCTATGTGATGGAGCTCAACAAGTACCTGGCACAAGATTCAAGGATTGAGATTTGCCAGCTCCCCGTGGGAGATGGGATTACCCTGTGCCGCCGCATCATCTGA 741 0.4723 MANEEEPKNHVFGIKDLSHKTLLQSDALYQYILDTSVYPREHECLKELREMTEKHPRNLMATPPDEGQLLSMLIKLINAKNTLEIGVYTGYSLLSTALALPPDGKILALDVNREYYELGLPIIEKAGVAHKIDFKEGPALPFLDELLKDENKKGTFDFVFVDADKNNYLNYHKRVIDLVKVGGLIGYDNTLWAGSVAASPDAPFMDYIKPLRGYVMELNKYLAQDSRIEICQLPVGDGITLCRRII* 247
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g2494 246 CDD AdoMet_MTases 83 185 - -
Pvu3g2494 246 Gene3D Vaccinia Virus protein VP39 11 246 IPR029063 -
Pvu3g2494 246 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 21 245 IPR002935 GO:0008171
Pvu3g2494 246 PANTHER CAFFEOYL-COA 3-O-METHYLTRANSFERASE 5 246 - -
Pvu3g2494 246 PANTHER O-METHYLTRANSFERASE-RELATED 5 246 - -
Pvu3g2494 246 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 25 244 IPR029063 -
Pvu3g2494 246 Pfam O-methyltransferase 34 245 IPR002935 GO:0008171
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g2494 Pvu-Chr3 46610302 46615831 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g2494 4 245 Monolignol Biosynthesis Gene Families AT4G34050 71.901 4.31e-131 370
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g2494 K00588 - gmx:100305498 456.062
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g0177 2 1920109 1921873 Pvu3g2494 3 46610302 46615831 ECH
Pvu3g2494 3 46610302 46615831 Pvu3g2494 3 46610302 46615831 ECH
Pvu2g0177 2 1920109 1921873 Pvu3g2494 3 46610302 46615831 PCT