Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pvu3g2485 | ATGGAAGCACCAGAGAATTGCTCCGTCAAAGTCGCTCTTCACATTCGTCCTCTCATTGCCGATGAACGACAGCAAGGTTGCATTGAATGTGTTTCCGTCACGCCCGGGAAGCCTCAGGTGCAGATTGGATCACATTCCTTTACATTTGATAATGTTTATGGAAATGGTGGATCTCCTTCAGTTGACATGTTTGAGGAATGCGTTGCTCCATTGGTTGAGGGTTTATTCCAAGGATACAATGCTACAGTACTTGCTTATGGTCAGACAGGATCTGGGAAAACGTATACCATGGGGACTGGCTATAATGACAATTGTCGGACTGGGTTAATTCCTCAGGTTATGAGTGCCTTATTCAACAAAGTTGAAACACTAAAGCATCAAACAGAATTTCAGTTGCGAGTCTCCTTCATTGAGATTTTAAAGGAAGAGGTCAGGGACCTGTTGGATATGGTATCTTTGGGAAAATCAGACACCTCTAACTCTAATGGCCATTCTGGAAAAATAACTGTTCCTGGGAAGCCATCAATACAAATTCGTGAAACAGCAAATGGAATAATAACACTGGCAGGAATAACTGAAATTGCTGTAAGTACGTTGCGTGAGATGTCTGCATACTTGGAGCAGGGTTCTTTAAGTAGGGCAACGGGAAGTACAAATATGAACAACCAGTCCAGTCGGTCACATGCCATTTTCACAATTACATTAGAACAAATGCACAAGCTCCATTCTGTTTCTTCCAACAATGACTCTTCAGATGAGGATATGGGTGAAGAATACCTTACAGCAAAGCTCCATTTGGTAGATCTAGCTGGATCTGAACGAGCTAAAAGAACAGGTTCTGATGGTCTTCGTTTGAAGGAAGGCATACACATCAATAGAGGTCTTCTTTCTCTTGGTAATGTCATAAGTGCACTGGGGGATGAGAAAAAGCGAAAGGAAGGTGTGCATGTTCCTTATCGTGATAGCAAACTCACTCGACTCTTGCAGGATTCACTTGGTGGAAACAGCAAAACTGTCATGATAGCTTGCATAAGTCCTGCTGATGTCAATGCCGAGGAAACTCTCAACACTCTCAAGTATGCAAACCGTGCTCGCAATATTCAAAATAAGCCTGTTGTTAACCGAGATCTAATATCCAATGAGATGCAGCAAATGCGCCAGCAGTTGAAGTACTTGCAGGCTGAACTCTGTTCTCGGGGAGCAGGAGCAGCTTCTACTGATGAAGTTCTTAAGGAAAGGATTGCTTGGCTTGAGGCAACTAATGAACATCTTTACAGAGAACTTCATGAATATCGCAGTAGATGTGCTTTTGCAGAGAGATGTGAAATCGATGAACCTGCAGATGGAAACATTTATCTCATGAAAGCTGAAGGGCTTGAGAGGCGCTTTCAGAGCTTAGATTCGTCTGACCATCCCATGGTTGGAAGTATATCTGGTGATGATTCAAGGGAAACTGATGAAGTAGAAAAAGAGTTGGAGCATGCGCTATTACAAAATACCATGGATAAAGAGATGAATGAGTTGAATAAGCGGTTGGAGCAGAAAGAGTCTGAGATGAAGCTCATTGGAGTTGATACTGAGGCACTCAAACAACACTTCGGGAAGAAAATTGTGGAACTTGAGGAGGAGAAAAGAAAAGTGCAGGAAGAGAGGGACAGATTATGGCATGAGGTAGAGAATCTTTCTACTAATTCAGATGGGCTAGCACACAAAACCCAAGATGTTCGTGGCCAAAAGTTGAAAGCATTGGAAGCACAGATTTTAGACCTCAAGAAGAAACAAGAAAGCCAGGTGCAACTATTAAAACAAAAAGAGAAGAGTGAAGAAGCTGCAAAACGATTGCAGGCTGAGATACAGTATATCAAGGCTCAGAAGGTTCAGTTGCAGCATAAAATAAAACAAGAGGCTGAACAATTTCGACAATGGAAGGCTTCTCGTGAGAAGGAGCTGCTCCAGTTGAAAAAGGAGGGAAGAAAGAATGAATACGAAAGACATAAACTTGAGGCTCTAAACCATCGTCAAAAAATGGTTCTTCAAAGGAAGACAGAGGAAGCAACAATAGCTACAAAAAGGCTAAAAGAATTGTTGGAAGCCCGTAAATCTTCTCCTCGTGACAACTCTGTTTATTCAAATGGACATGTACATCCCGGGCTGGTCAATGAAAAATCTCTCCAAAAGTGGCTTGATCAGGAGGTGGAGGTCATGGTTCATGTGCATGAAGTTCGTGCGGAATTTGACAAACAAAAACAAGTCCAAGCTGCAGTGGAAGAAGAATTGGCTTTACTAAAGCAGGATCAGTTTTCAGAGGGGCAGACTATTCCCACAGGAAAGAGCAGATATTTGAGGCTGTTATCTATGTCGCCAAATGCAAAAGTTGAGAGAATAGCTTCTCTTGAGAACATGCTGTCCATGTCTTCAGTTGCTTTGAAAGCCATGGCTTCACAACTTACTGAGGCTGAAGAAAGGGAACGCTCGTTAAACAACCGTGGTCGTTGGAACCAGCTACGCTCAATGGGAGATGCAAAGAATGTGCTTCAGTATTTGTTCAATGCTACTGCAGAAGCAAGGTGTCAATTGTTGGAAAAGAATATGGAACTTAAGGATTTGAAAGAGCAACTAAATGAGCTTGTAGCACTATTACAACAAAGTGAAGCACAAAGAAAAGAACTTGCAAAGGAGGAAAAAATAAGGGAACAAGCTGTTGCCATCACATTGAATACACCGGCATTGGAAAATTCACGGTCCTTGAAACACCTTGCTGATGAAATGAGTGGTCCGTTGTCTCCAATGTCACTTCCTGCACCAAAGCAACTCAAATTCACTCCTGGCGTTGTTAATTGGTCTGTCACGGAGTCGACTACATCTTTAGACGAAGCACGAAAGATGATACCCATTGGAGAGTTGTCAACAAAGAGGCTAGCTGCCATGGGACAAGCCGGAAAACTTTGGAAGTGGAAGAGAAGTCATCATCAATGGCTGCTACAGTTTAAGTGGAAGTGGCAGAAGCCCTGGAAACTCTCAGAATGGATCAAACACAGTGATGAAACAATTATGAGATCAAGGCCACGAGCACAAGCTTTAATTAATGTGATGTGA | 3096 | 0.4251 | MEAPENCSVKVALHIRPLIADERQQGCIECVSVTPGKPQVQIGSHSFTFDNVYGNGGSPSVDMFEECVAPLVEGLFQGYNATVLAYGQTGSGKTYTMGTGYNDNCRTGLIPQVMSALFNKVETLKHQTEFQLRVSFIEILKEEVRDLLDMVSLGKSDTSNSNGHSGKITVPGKPSIQIRETANGIITLAGITEIAVSTLREMSAYLEQGSLSRATGSTNMNNQSSRSHAIFTITLEQMHKLHSVSSNNDSSDEDMGEEYLTAKLHLVDLAGSERAKRTGSDGLRLKEGIHINRGLLSLGNVISALGDEKKRKEGVHVPYRDSKLTRLLQDSLGGNSKTVMIACISPADVNAEETLNTLKYANRARNIQNKPVVNRDLISNEMQQMRQQLKYLQAELCSRGAGAASTDEVLKERIAWLEATNEHLYRELHEYRSRCAFAERCEIDEPADGNIYLMKAEGLERRFQSLDSSDHPMVGSISGDDSRETDEVEKELEHALLQNTMDKEMNELNKRLEQKESEMKLIGVDTEALKQHFGKKIVELEEEKRKVQEERDRLWHEVENLSTNSDGLAHKTQDVRGQKLKALEAQILDLKKKQESQVQLLKQKEKSEEAAKRLQAEIQYIKAQKVQLQHKIKQEAEQFRQWKASREKELLQLKKEGRKNEYERHKLEALNHRQKMVLQRKTEEATIATKRLKELLEARKSSPRDNSVYSNGHVHPGLVNEKSLQKWLDQEVEVMVHVHEVRAEFDKQKQVQAAVEEELALLKQDQFSEGQTIPTGKSRYLRLLSMSPNAKVERIASLENMLSMSSVALKAMASQLTEAEERERSLNNRGRWNQLRSMGDAKNVLQYLFNATAEARCQLLEKNMELKDLKEQLNELVALLQQSEAQRKELAKEEKIREQAVAITLNTPALENSRSLKHLADEMSGPLSPMSLPAPKQLKFTPGVVNWSVTESTTSLDEARKMIPIGELSTKRLAAMGQAGKLWKWKRSHHQWLLQFKWKWQKPWKLSEWIKHSDETIMRSRPRAQALINVM* | 1032 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pvu3g2485 | 1031 | Coils | Coil | 809 | 829 | - | - | |
Pvu3g2485 | 1031 | SMART | kinesin_4 | 6 | 375 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Pvu3g2485 | 1031 | Coils | Coil | 375 | 395 | - | - | |
Pvu3g2485 | 1031 | Pfam | Kinesin motor domain | 35 | 367 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Pvu3g2485 | 1031 | Coils | Coil | 852 | 893 | - | - | |
Pvu3g2485 | 1031 | CDD | KISc_KIF4 | 7 | 368 | - | - | |
Pvu3g2485 | 1031 | PANTHER | KINESIN-LIKE PROTEIN KIN-4B | 1 | 1030 | - | - | |
Pvu3g2485 | 1031 | Gene3D | Kinesin motor domain | 1 | 395 | IPR036961 | - | |
Pvu3g2485 | 1031 | Coils | Coil | 580 | 631 | - | - | |
Pvu3g2485 | 1031 | ProSitePatterns | Kinesin motor domain signature. | 262 | 273 | IPR019821 | GO:0003777|GO:0005524|GO:0007018 | |
Pvu3g2485 | 1031 | Coils | Coil | 530 | 557 | - | - | |
Pvu3g2485 | 1031 | PANTHER | CHROMOSOME-ASSOCIATED KINESIN KIF4A-RELATED | 1 | 1030 | - | - | |
Pvu3g2485 | 1031 | Coils | Coil | 498 | 525 | - | - | |
Pvu3g2485 | 1031 | ProSiteProfiles | Kinesin motor domain profile. | 8 | 367 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Pvu3g2485 | 1031 | PRINTS | Kinesin heavy chain signature | 78 | 99 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Pvu3g2485 | 1031 | PRINTS | Kinesin heavy chain signature | 218 | 235 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Pvu3g2485 | 1031 | PRINTS | Kinesin heavy chain signature | 263 | 281 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Pvu3g2485 | 1031 | PRINTS | Kinesin heavy chain signature | 317 | 338 | IPR001752 | GO:0003777|GO:0005524|GO:0007018|GO:0008017 | |
Pvu3g2485 | 1031 | Coils | Coil | 678 | 698 | - | - | |
Pvu3g2485 | 1031 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 8 | 398 | IPR027417 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pvu3g2485 | Pvu-Chr3 | 46455321 | 46469724 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pvu3g2485 | 9 | 400 | Calmodulin-binding Proteins | AT5G65930 | 34.596 | 2.56e-55 | 207 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pvu3g2485 | - | - | gmx:100790341 | 1811.19 |