Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g2484 ATGCATGGTGCAAGCAGAAGGCCAACGGCGGCAGTCCTCCCTCTGCTGCTACTGATAATCAGGCTGGCCTCTTGCGGTGGCCCGCCGGTGTCCTCCGACGCGGTGTGGTTGCTGTCGTTTAAACGGGAAGCGGACGAGGACAGCAGGCTCCTCTACGCGCTGAACGAGCCCTACGACTACTGCGAGTGGGAGGGGGTGAAGTGCGCACAAGGGAGAGTAGTCCGGTTCGTGGTCCAGTCCATGGGCCTGCGCGGCCCATTCCCTCCGGACACCTTGACGAAACTAGACCAGCTCCGCGTGTTGAGCCTCCGCAACAACTCCCTCTTCGGGCCCATCCCCGATCTCTCTCCTCTTACTAACCTCAAGTCTCTCTTCCTCGACCACAACAACTTCTCCGGTTCCTTCCCTCCCTCTCTCATCCTCCTCCACCGCATCCTCACTCTCTCACTCTCCAACAACAATCTCTCCGGTTCGATCCCGCTTCGGCTCAATGTCCTCGACCGTCTCATTGCCCTCCGCCTCGATTCCAACAACTTCTCCGGCACCCTCCCTCCTCTCAACCAAACTGCGCTCAGACTCTTCAACGTTTCCAACAACAACCTCACTGGTCCTATTCCCGTCACTCCCACCCTCTCTAAACTCAACGCCGCTTCCTTTTCTGGAAACCCTGGCCTCTGCGGGGAGATTGTTCACAGAGACTGTGGCTCAGGCTCCCGCTTCTTCGGCCCCGCCACGTCCTCCTCCACGGCGCCGTTGAGCCAGAGCGAACAGTCTCAGGGTATTTTGGTTGTGCCTGCTTCCACCAAAACAAAGCATCATCAAAAGACCGGGCTGGTGGTTGTAGGTATTGTTGTGGCGGTTGTTCTTGTGAGTGTTTTTGTTGTGTCCGTGGTTTCGCTGGTGAGAAGGAGACAGATGGCGGCGGGGAAAGCGGCGGTTGTGGAGGGGGATGAGGTGGAGGAGGGTGTGGAGGAGGAGAGGGAGGTGAAGGTGAGGAGGATGGAGGAGGCGCACAGGAGTGGGAAGCTGGTTTTCTGCTGCGGGGAGATGCAGCAGTATACGCTGGAGATGCTGATGCGGGCTTCCGCGGAGTTGCTGGGGAGGGGGAGCGTGGGGACGACGTACAAGGCGGTGCTGGATTCGCGGTTGATTGTGACGGTGAAGAGGTTGGATGGGGGGAAGAGTGGGGGAAATGATGGGGTAGTGTTTGAGCGCCATATGGAGGCCGTGGGGAGGCTTCGCCACCCCAATTTGGTGCCTTTGAGGGCTTATTTTCAGGCCAAGGGAGAGAGGCTTGTCATATATGATTATCAGCCCAATGGCAGCCTCTTTAACCTCGTTCACGGGTCAAGATCAGCGAGGGCGAAGCCTTTGCATTGGACTTCATGCTTGAAAATAGCCGAAGATGTGGCACAAGGACTTGCTTATATACATCAAGTTTCAACTCTAATTCATGGCAACCTCAAATCTTCTAACGTCCTTCTTGGGACGGACTTTGAAGCCTGTATTACGGACTATTGTTTATCCTTCTTTGCAGATTCTTCGTTCACTGTAGATCCCGATTCTGCGGCTTATAGAGCACCCGAGGCTCGCAACTCTAGCCGCAGAGTCACTGCCAAATCTGATGTGTATGCTTATGGAGTTCTTCTACTAGAGCTTTTGACGGCAAAACACCCTTCCCAACAACCTTTTCTTGCACCAGCGGATTTGCAAGATTGGGTGAGAGCAATGAGGGATGATGATGGCAGTGAAGACAACCGGCTAGAGATGCTCACGGAGGTTGCCAGTATTTGCAGTGCAACCTCGCCGGAGCAGAGGCCAGCAATGTGGCAAGTTCTTAAGATGATACAGGGAATAAAGGACAGCGTTTCGATGGAGGATACTTCATTTACTGGGCTCTCCTAG 1905 0.5507 MHGASRRPTAAVLPLLLLIIRLASCGGPPVSSDAVWLLSFKREADEDSRLLYALNEPYDYCEWEGVKCAQGRVVRFVVQSMGLRGPFPPDTLTKLDQLRVLSLRNNSLFGPIPDLSPLTNLKSLFLDHNNFSGSFPPSLILLHRILTLSLSNNNLSGSIPLRLNVLDRLIALRLDSNNFSGTLPPLNQTALRLFNVSNNNLTGPIPVTPTLSKLNAASFSGNPGLCGEIVHRDCGSGSRFFGPATSSSTAPLSQSEQSQGILVVPASTKTKHHQKTGLVVVGIVVAVVLVSVFVVSVVSLVRRRQMAAGKAAVVEGDEVEEGVEEEREVKVRRMEEAHRSGKLVFCCGEMQQYTLEMLMRASAELLGRGSVGTTYKAVLDSRLIVTVKRLDGGKSGGNDGVVFERHMEAVGRLRHPNLVPLRAYFQAKGERLVIYDYQPNGSLFNLVHGSRSARAKPLHWTSCLKIAEDVAQGLAYIHQVSTLIHGNLKSSNVLLGTDFEACITDYCLSFFADSSFTVDPDSAAYRAPEARNSSRRVTAKSDVYAYGVLLLELLTAKHPSQQPFLAPADLQDWVRAMRDDDGSEDNRLEMLTEVASICSATSPEQRPAMWQVLKMIQGIKDSVSMEDTSFTGLS* 635
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g2484 634 SUPERFAMILY L domain-like 31 227 - -
Pvu3g2484 634 ProSiteProfiles Protein kinase domain profile. 360 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu3g2484 634 PANTHER LRR RECEPTOR-LIKE KINASE 11 630 - -
Pvu3g2484 634 Gene3D Ribonuclease Inhibitor 188 236 IPR032675 -
Pvu3g2484 634 ProSiteProfiles Leucine-rich repeat profile. 97 119 IPR001611 GO:0005515
Pvu3g2484 634 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 11 630 - -
Pvu3g2484 634 Gene3D Phosphorylase Kinase; domain 1 324 437 - -
Pvu3g2484 634 Pfam Protein kinase domain 363 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu3g2484 634 SUPERFAMILY Protein kinase-like (PK-like) 364 621 IPR011009 -
Pvu3g2484 634 Gene3D Ribonuclease Inhibitor 30 187 IPR032675 -
Pvu3g2484 634 Gene3D Transferase(Phosphotransferase) domain 1 439 631 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g2484 Pvu-Chr3 46447926 46451312 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g2484 32 627 Receptor kinase-like Gene Family AT3G50230 54.153 0.0 638
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Pvu3g2484 Pkinase 1.3e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g2484 - - gmx:100783086 932.169