Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g2479 ATGGCCGTGGAGCTCATGACGGGGTACAGAACCACCACTTTCACAACCAAAGCCGAGGAAAATGCCGTCCAAGAAGCCGCCTCCGGTTTGGAGAGCGTGGAGAAGCTAATCAGACTCCTCTCTCAGACCCCCCAACAATACAACTCCTCCAATCAAATCGCCATCGACTGCAAGGCCGTCGCTGACCTCGCAGTTTCCAAGTTCAAAAACGTCATTTCGCTCCTCGGCCCGGGCCCAGGCCCAACCCCAACCGGCCACGCCCGCTTCCGAAGAGCTCCTCTCCCTCCTCCTCCTCCTCCTCCGCCTCCTTCTTCCACACAACCCTCCCAACCTTCCGTCTTCCACGCCACCCCTCTGCACCAAATCCCCAAAACAGACAACACCCTCAACAACGACCCCTCTTCCAAAACCATTTATTTCTCCTACCCCACCCCCGCCACTTCCTTCATCTCCTCCCTCACCGCCGACGCCCACACCAAACAACCCTCTTCCTCCTCGCCGCCCCCGCCTGCGCCGGGGGCTTTCCACATCACCTCTCTCTCTCACGTCTCGTCCGCGGGGAAGCCTCCCCTCTCCTCCTCCTCCTCTTTCAAGAGGAAGTGCAGCTCTGAGAACTTGCCTTCTGGAAAGTGCGGTAGCTCCTCTAGCCGCTGCCATTGCTCCAAAAAGAGTAGGAAAATGAGGTTGAAGAGGGTGGTGAGGGTACCGGCTATAAGCTTGAAGATGGCTGATATTCCACCAGATGATTATTCTTGGAGGAAGTATGGTCAGAAACCAATCAAAGGATCCCCTCATCCAAGGGGTTACTACAAGTGCAGTAGCGTTAGAGGGTGTCCAGCGCGCAAGCATGTGGAACGAGCTTTGGATGATCCAGCTATGCTGGTGGTAACCTATGAGGGGGAGCACAATCACGCTCTCTCTGCGGCTGATGCTACTAACCTTATTCTTGAATCATCTTGA 960 0.5573 MAVELMTGYRTTTFTTKAEENAVQEAASGLESVEKLIRLLSQTPQQYNSSNQIAIDCKAVADLAVSKFKNVISLLGPGPGPTPTGHARFRRAPLPPPPPPPPPSSTQPSQPSVFHATPLHQIPKTDNTLNNDPSSKTIYFSYPTPATSFISSLTADAHTKQPSSSSPPPPAPGAFHITSLSHVSSAGKPPLSSSSSFKRKCSSENLPSGKCGSSSSRCHCSKKSRKMRLKRVVRVPAISLKMADIPPDDYSWRKYGQKPIKGSPHPRGYYKCSSVRGCPARKHVERALDDPAMLVVTYEGEHNHALSAADATNLILESS* 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g2479 319 SUPERFAMILY WRKY DNA-binding domain 243 305 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pvu3g2479 319 ProSiteProfiles WRKY domain profile. 241 307 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pvu3g2479 319 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 15 319 IPR044810 GO:0003700
Pvu3g2479 319 MobiDBLite consensus disorder prediction 75 114 - -
Pvu3g2479 319 PANTHER WRKY TRANSCRIPTION FACTOR 7-RELATED 15 319 - -
Pvu3g2479 319 MobiDBLite consensus disorder prediction 155 177 - -
Pvu3g2479 319 Pfam WRKY DNA -binding domain 248 304 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pvu3g2479 319 MobiDBLite consensus disorder prediction 90 108 - -
Pvu3g2479 319 Pfam Plant zinc cluster domain 198 244 IPR018872 -
Pvu3g2479 319 Gene3D WRKY domain 233 307 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pvu3g2479 319 SMART WRKY_cls 246 306 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g2479 Pvu-Chr3 46413673 46415523 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g2479 19 304 WRKY Transcription Factor Family AT2G24570 45.092 9.94e-74 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pvu3g2479 WRKY 4.4e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g2479 - - gmx:100170685 417.542
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g2479 3 46413673 46415523 Pvu3g2479 3 46413673 46415523 ECH
Pvu3g2479 3 46413673 46415523 Pvu2g0163 2 1777772 1779281 PCT