Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g2476 ATGGAAGACAAGATAGACATTGCAGACAAGAAGGTGTTGGTTGATATTGTAAAATTGGTACAAAAGAGAGGCCTCAAGGGTAAGCTTGGAGACTGGAAGGAATTCTTGGACACTCATGACAGAAGGTTTGGGTCCAATTTGAGTGATCCATCAAAGCGACCCCATGAGTTATTGGCTACATTTCTAAAGTCTTTTTCGGAGGAGGAAGATTTGAAGTTTTTTGATAACATCATGCGACATCATGCAAACCAATACATGTTGGAGCGACTGAAAGATAAATCCCATGAGTCCCCGGAGCAGAGGCTAGTTCAAATAACTCTGCAGCATCCGTTATATCCATTGGACTATTCATTTCCATCAATTGATGAGGGGTGGATAGTTATAAATGTTAAAAACAAACCCAAGGTGATGAAGTCTACTACAATGCTTGCTGTTGATTGTGAAATGGTTCTTTGTGAAGATGGGACAGAAGCGGTAGTTAAAGTCTGTGTGGTAGACCATAATTTAGAGGCCAAACTAAATGAATTTGTAAAACCTGACCAAAATATTGTGGACTACAGAACAGAGATCACTGGTGTCTGTTCTAAAGATCTAGAGGCAGTGACTTGCTCCTTGGCTGATATACAGAAATCCATGAAGAAGTTGTTATCAAAAGGAACCATATTAGTGGGTCACAGTTTGCATAATGATCTACGTGCGCTGAAGCTTGATCATGTCAGAGTCATTGATACTTCCTTTATCTTCCAATCCTCGGATGGATCTATGCACAGAAGACCTTCTTTGAATAGTTTATGTCAGGCTGTGTTGGGTTGTGGTGTTCGGGAAAAAGGTGCTCCACATAATTGTCTAGATGATGCATGTGCAGCAATGAAGCTTGTTCTTGCAAAGATCAAACATGGTGTTGATAGGGAATTTTCAATTTCATTGGCTCAAGAGCATGTTCCAGAATGTGATACATCAAAGCTTTTTCTTCACAAGATACCAACCACTGTAAACACTGAAGCACTGCATAACATTGTTCCTGGAGAATTCAGAACTGAACTGCAGCATTCCAAGAATGGTCAAGGAAGACATTATTCTGCCTTAGCTGTTTTTAAAAATCCACAAGAGGCTGATAAGGCCTATAAAAATGTCCAGGGAAGCCAATTAAAGGATACATATGGGCGTCCACAGAAACTTGTAACATTTCGGCTAAGTACAGGCATGTCTGCCACTCTATTTGTTCGGAAAATGGTAAGTGATGAACCCAATGACCGGATTCAATCTAACAAGAGGGCTTTACAAACGGATGAGGCAGTTGATGTTTCCAAGAAAGCAAAGATAGATAAAAACATTGAAGAGGATGATGCCCCAAAGAAAGCAAAGATAGATAAAAACATTGAAGAGGATGATGCCCCAAAGAAAGCAAAGATAGATAAAAACATTGAAGAGGATGATGCCCCAAGCAGTGATGCCCATTCAAATGAGATTGAAGCACTGAATCAACGATTAAAGCAAAGTGAATTGGAGATCGAATCATTGAGGAAAGAGCTGACACAGAAAGATTTTGAAATATCCGCGCTGCATAAAATGGTAGCCTCTATGAATAAGCGAAAAAATGTAGCCAGGAGATGA 1614 0.399 MEDKIDIADKKVLVDIVKLVQKRGLKGKLGDWKEFLDTHDRRFGSNLSDPSKRPHELLATFLKSFSEEEDLKFFDNIMRHHANQYMLERLKDKSHESPEQRLVQITLQHPLYPLDYSFPSIDEGWIVINVKNKPKVMKSTTMLAVDCEMVLCEDGTEAVVKVCVVDHNLEAKLNEFVKPDQNIVDYRTEITGVCSKDLEAVTCSLADIQKSMKKLLSKGTILVGHSLHNDLRALKLDHVRVIDTSFIFQSSDGSMHRRPSLNSLCQAVLGCGVREKGAPHNCLDDACAAMKLVLAKIKHGVDREFSISLAQEHVPECDTSKLFLHKIPTTVNTEALHNIVPGEFRTELQHSKNGQGRHYSALAVFKNPQEADKAYKNVQGSQLKDTYGRPQKLVTFRLSTGMSATLFVRKMVSDEPNDRIQSNKRALQTDEAVDVSKKAKIDKNIEEDDAPKKAKIDKNIEEDDAPKKAKIDKNIEEDDAPSSDAHSNEIEALNQRLKQSELEIESLRKELTQKDFEISALHKMVASMNKRKNVARR* 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g2476 537 SMART exoiiiendus 141 302 IPR013520 -
Pvu3g2476 537 CDD REX1_like 143 294 IPR034922 -
Pvu3g2476 537 Coils Coil 483 517 - -
Pvu3g2476 537 CDD RRM_SF 322 385 - -
Pvu3g2476 537 Gene3D - 137 313 IPR036397 GO:0003676
Pvu3g2476 537 PANTHER RNA EXONUCLEASE REXO1 / RECO3 FAMILY MEMBER-RELATED 11 437 - -
Pvu3g2476 537 PANTHER SMALL RNA DEGRADING NUCLEASE 2 11 437 - -
Pvu3g2476 537 MobiDBLite consensus disorder prediction 415 491 - -
Pvu3g2476 537 SUPERFAMILY Ribonuclease H-like 142 298 IPR012337 -
Pvu3g2476 537 MobiDBLite consensus disorder prediction 415 485 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g2476 Pvu-Chr3 46378690 46384119 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g2476 143 292 C2H2 Transcription Factor Family AT2G48100 28.824 1.37e-07 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g2476 K14570 - gmx:100785565 766.533
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g2476 3 46378690 46384119 Pvu3g2476 3 46378690 46384119 ECH