Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g2474 ATGAGTCTCTTCTGTGAAACTCTTATAATTTCACTGCTTCTTCTCCTCACTGTTAACCACTGCTGTGGCCTCACTAGAGACGGCGTTCTGTTGCTTTCTTTCAAGTACGCTGTCTTCAGCGACCCACTTTACGTCCTCGCAAACTGGAACTACGCTGACGAGACACCGTGTTCGTGGAACGGCGTTTCCTGTTCCACTGTAGCAGCGACGAACATCACCGAGTACCGCGTCACGTCGTTGTCGCTTCCCAATTCTCAGCTTTTCGGCTCAATTCCCTCCGATCTGGGATCCATTGAGCACCTTCAAGTTCTAGACCTTTCCAACAACTCCCTCAACGGCTCTCTTCCTTCTTCGCTGTCCCAAGCCTCCCAGCTTAGGTTCCTCAACCTGTCTAACAACTTAATAACAGGGGAGGTTCCGGACTCCATACCGCAGCTTCGGAATCTTCAATGCCTAAACCTCTCCGACAATGCTTTGGCGGGAAAACTGCCTCACGATTTCTCCAACATGCACAACCTAACTCAGGCTTCTTTCAAGAACAATTACTTGTACGGTTTTCTTCCCAGCGGGTTGAGAACGTTGCAGGTTTTGGATCTGTCTTCAAACCTGTTCAACGGGACTCTTCCCGCGGATTTCGGCGGAGACGCCATGCGTTACCTAAACATCTCCTACAACAGATTTTTCGGGGAAATCCCGAAGGAGTTCGCAGCAAACATTCCGGGGAACGCCACCGTGGATCTCTCGTTCAACAATTTCACCGGACAAGTTCCCCACTCCGCTGTGTTTTTGCATCAAAACCGGGAGTCGTTCTCCGGTAACGTTAACTTGTGTGGTGAACAAACGAAGAATGTGTGTCCAGTTCCTTCTTCGTCGTCCTCTAAACCGAAAGTTTCTGCACCTATATCTCCTCCTGCAATCGCGGCAATCCCGCGGACGTTTGATTCTTCGGCGGCGCCGAGGGGGAAAAAAGAGAGTGGTCTGAAACGAGGAACGGTTATAGGAATCGTTTTGGGAGACGTAATTGGGATTGCGATCCTGGGCATGATATTCGTGCAGGTGTACCGGTTGAAGAAAAAGAAGGAGGAGGCGGTTGCGAAGAGTGGGAGTGAAAGTTCGTGGGAGTGTAGAAGGTTAATGAGGTGGTGGTGTTTGAGTAAAAGAGCGGAAGAGGAAGAGTGTTCGGAGACAGGAAGCAGCTGCGAAAGTGAGGTGGAGGAGCAGAAGCAGAAGGGTCCGCAACAGGAGGAGAAAACGGGGAGTCTTGTGATTGTGGATGGTGAACGAGAGCTTGAACTGGAAACGCTGCTGAAGGCTTCTGTGTACATATTGGGTGCGACGGGGTCAAGCATAATGTACAAGGCTGTCTTGGATGATGGTATGTCCTTGGCGGTTCGGAGAATTGGGGAGAGCGGCGTGGAGCGTTTCAAGGATTTCCAGAACCAGGTTCGACTTATTGCTAAACTGGTCCACCCTAATCTGGTTCGCGTTCGAGGCTTCTACTGGGGACACCATGAGAAGCTCATCATCTATGATTTCGTTCCAAACGGATGCCTTGCCAATGTTCGTTACAGGAAGGTGGGCTCCTCGCCGACTCATTTACCGTGGGAGATCAGGCTGAAGATAGCGAAAGGGGTGGCACGTGGGCTGACTTACCTCCACGAGAAGAAACACGTGCATGGAAACTTGAAGCCTAGCAATATTCTGTTAGGCAATGACATGGAGCCCAAAATCGGAGACTTTGGGCTTGAGAGGATAGTGACGGGGGACACCAGTTATAAGGCTGGCGGATCGGCGCGTATTTTTGGGAGCAAGAGATCCACGGCCTCGCGGGACAGTTTCCAAGACACTACGTACGGGCCCAGCCCGAGCCCGAGCCCGAGCCCTAGCTCCTTGATGGGCTTGTCTCCTTACCATGCTCCCGAGTCGCTCAGGAACCTGAAGCCTCACCCCAAGTGGGACGTGTACTCTTTTGGGGTCATGTTTCTTGAGCTGCTAACGGGGAAGATTGTGGTTTTGGATGAGATGGGCCAAGGGCCTGGGCTTTTGATGGAGGATAAGAACCGGGCCTTGCGTATGGTTGATATGGCTATCCGGGCCGACATGGAGGGTAGAGAGGAGGCCCTCTTGGCCTACTTCAAGCTAGGGTATAGTTGTGTGTCCAGCGTTCCACTGAAAAGGCCTCCAATGAAAGAGGTGTTACAACTTCTTGAAAAGATCTCATCCTCCTCTTCTTCCTTCTCTTATTATTATAGCGTCTGA 2259 0.5135 MSLFCETLIISLLLLLTVNHCCGLTRDGVLLLSFKYAVFSDPLYVLANWNYADETPCSWNGVSCSTVAATNITEYRVTSLSLPNSQLFGSIPSDLGSIEHLQVLDLSNNSLNGSLPSSLSQASQLRFLNLSNNLITGEVPDSIPQLRNLQCLNLSDNALAGKLPHDFSNMHNLTQASFKNNYLYGFLPSGLRTLQVLDLSSNLFNGTLPADFGGDAMRYLNISYNRFFGEIPKEFAANIPGNATVDLSFNNFTGQVPHSAVFLHQNRESFSGNVNLCGEQTKNVCPVPSSSSSKPKVSAPISPPAIAAIPRTFDSSAAPRGKKESGLKRGTVIGIVLGDVIGIAILGMIFVQVYRLKKKKEEAVAKSGSESSWECRRLMRWWCLSKRAEEEECSETGSSCESEVEEQKQKGPQQEEKTGSLVIVDGERELELETLLKASVYILGATGSSIMYKAVLDDGMSLAVRRIGESGVERFKDFQNQVRLIAKLVHPNLVRVRGFYWGHHEKLIIYDFVPNGCLANVRYRKVGSSPTHLPWEIRLKIAKGVARGLTYLHEKKHVHGNLKPSNILLGNDMEPKIGDFGLERIVTGDTSYKAGGSARIFGSKRSTASRDSFQDTTYGPSPSPSPSPSSLMGLSPYHAPESLRNLKPHPKWDVYSFGVMFLELLTGKIVVLDEMGQGPGLLMEDKNRALRMVDMAIRADMEGREEALLAYFKLGYSCVSSVPLKRPPMKEVLQLLEKISSSSSSFSYYYSV* 753
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g2474 752 MobiDBLite consensus disorder prediction 605 620 - -
Pvu3g2474 752 SUPERFAMILY L domain-like 26 278 - -
Pvu3g2474 752 MobiDBLite consensus disorder prediction 605 634 - -
Pvu3g2474 752 MobiDBLite consensus disorder prediction 394 418 - -
Pvu3g2474 752 PRINTS Leucine-rich repeat signature 101 114 - -
Pvu3g2474 752 PRINTS Leucine-rich repeat signature 146 159 - -
Pvu3g2474 752 ProSiteProfiles Leucine-rich repeat profile. 124 146 IPR001611 GO:0005515
Pvu3g2474 752 SUPERFAMILY Protein kinase-like (PK-like) 442 740 IPR011009 -
Pvu3g2474 752 PANTHER BNAC07G16060D PROTEIN 10 742 - -
Pvu3g2474 752 Pfam Leucine Rich Repeat 100 120 IPR001611 GO:0005515
Pvu3g2474 752 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 10 742 - -
Pvu3g2474 752 Pfam Leucine rich repeat N-terminal domain 27 65 IPR013210 -
Pvu3g2474 752 Gene3D Transferase(Phosphotransferase) domain 1 514 748 - -
Pvu3g2474 752 Gene3D Ribonuclease Inhibitor 191 287 IPR032675 -
Pvu3g2474 752 Gene3D Ribonuclease Inhibitor 25 190 IPR032675 -
Pvu3g2474 752 SMART LRR_typ_2 98 122 IPR003591 -
Pvu3g2474 752 SMART LRR_typ_2 146 169 IPR003591 -
Pvu3g2474 752 SMART LRR_typ_2 191 214 IPR003591 -
Pvu3g2474 752 Pfam Protein kinase domain 443 734 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu3g2474 752 ProSiteProfiles Protein kinase domain profile. 437 739 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu3g2474 752 Gene3D Phosphorylase Kinase; domain 1 402 512 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g2474 Pvu-Chr3 46342346 46345143 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g2474 6 750 Receptor kinase-like Gene Family AT4G37250 55.199 0.0 783
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Pvu3g2474 Pkinase 3e-29 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g2474 - - pvu:PHAVU_003G240400g 1352.42