Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g2471 ATGGAAACGCTTCCTTACACGATCCCTTCTACTAAATTACACTCCCTTCGTATTTACACCCGTGCTACACCGATTCCATTTTCCACCCTCCCTTTTCGCCCTCCTGGAATTTCAATCAAACCTTTGTATTCCCCCAAATTTCTCATTCTCCCTCCTCGCAGGTATCGCTGCGTCGCTGACTCCTCCAATAATCACCACCATCACGACCATCAAGGTCACCACCACCATCACGACCATCAAGACCATCAAGGTCACCACCACCACCACCACCATCACCATCATCACCACTCGCACGGCATCGATGGTGCTAATCTCACTGGGCCCCAAAAGGCGGTTATCGCGTTCGCCAAAGCCACCAGATGGATGGACTTGGCAGATATCCTTAGAGAGCACTTGCATCTCTGCTGTTTCTCCACCGTTTTATTTGTGGCTGCTGCCATTTGCCCTCATACCTTACCCAAGCCACTCGTCAGGCCTTTTCAAAACTCTCTCATTTTCATCGCATTCCCTTTGGTTGGGGTTTCTGCATCACTTGATGCTCTTATTGAGATCAGTAGTGGAAAGGTGAACATCCATGTGTTAATGGCAATGGCTGCCTTTGCATCAATATTTATGGGAAACTCTTTGGAAGGAGGCTTGCTTCTTGCCATGTTTAATCTGGCGCATATAGCCGAAGAGCATTTCACCAGCCGATCGATGGTTGATGTCAGAGAGTTGAAAGAAAATAATCCAGATTTTGCCCTTGTTCTGGATACCAAGGATGATAAACTCCCCAATACATTTGACTTGGCATACAAGAGGATTCCCGTGCATGATGTAACTGTAGGATCATATATTCTGGTTGGAGCCGGCGAGTCGGTACCAGTGGATTGTGAAGTATTCCAAGGCAATGCCACAATTACCATCGAGCACTTGACAGGGGAAGTGAAACCTTTGGAAGCCAAAGTTGGAGATAGAATTCCTGGCGGTGCAAGGAACTTAGATGGGAGGATAATTGTGAAGGTAACAAAAACCTGGAAGGAATCAACTCTCAGCAAAATTGTTCAGTTGACTGAAGAAGCACAGTCAAATAAACCTAAACTTCAAAGGTGGCTGGATGAATTTGGTGAACGATATAGCCAAGTTGTTGTGGTGCTATCCATTGCAATTGCTGTTATTGGACCACTTCTATTTAAGTGGCCGTTCATTAGTACATCTGCTTGCAGAGGTTCAATTTACAGAGCGTTAGGGCTTATGGTGGCAGCATCACCTTGTGCCTTGGCTGTGGCCCCATTGGCGTATGCTATAGCAATCAGTTCCTGTGCCAAAAAGGGGATATTACTCAAAGGTGGGCATGTTCTCGATGCTCTAGCTTCTTGTCGTACTATTGCATTTGACAAAACAGGGACATTGACAACTGGTGGACTTGTATTCAAGGCAATTGAGCCCATTTACGGTCACCATGTTAGAAACAATGTATCAAAATTTTCTTCCTGTTGCATTCCCACTTGTGAAAAAGAAGCTCTTGCGGTTGCTGCAGCTATGGAAAAGGGTACTACACACCCTATTGGAAGGGCTGTAGTTGACCATAGTGAAGGCAAAGACCTCCCATCTATTTCCGTTGAAAGTTTTGAATACTTTCCTGGTAGAGGCCTTACTGCTACTGTTAACAACATTGAGTCAGGAAGGGAAAGTGCCAAACTATTAAAAGCATCACTTGGGTCTATAGATTTCATCACTTCTTTTTGTCAATCTGAAGATGAGTCAGAAAAGATCAAGGAAGCGGTTAATACATCTTCTTATGGAAGTGAATATGTTCATGCTGCCCTTTCAGTTAATCAGAAGGTAACATTGATTCATCTAGAGGATAGGCCTCGTCCTGGGGTTTTTAATGTTATTCAAGAATTGCAAGATGAAGCAAAGTTTCGTGTGATGATGTTAACCGGAGATCATGAGTCTAGTGCAAGGAGAGTTGCAAGTGCTGTGGGCATCAATGAGTTTCATTGCAACCTGAAGCCTGAAGATAAGCTGAGTCATGTGAAGGATACCTCAAGAGATATGGGGGGAGGCCTAATTATGGTGGGTGAAGGCATCAATGATGCCCCAGCACTAGCTGCGGCAACTGTTGGGATAGTTCTTGCTCACCGTGCTAGTGCAACAGCCATAGCTGTTGCAGATATATTGTTGCTTAGAGAAAACATTTCTGCAGTGCCATTTTGTATTGCCAAGTCTCGCCAGACAACTTCACTGATTAAACAAAATGTTGCTTTGGCATTGACGTCCATAGTTATGGCTTCCCTTCCATCAGTTTTGGGATTTCTGCCATTGTGGTTAACGGTTCTTTTACATGAAGGTGGAACCTTGCTTGTCTGTCTGAATTCCGTACGTGCTCTGAATGAGCCATCTTGGTCCTGGAAGCATGATATCTTACATTTGATTAGCCAGATTAAATCTAGTCTTCTGTCTCTCAAGCAGATATCACGGGCTCAAACAGTATCATAA 2481 0.4446 METLPYTIPSTKLHSLRIYTRATPIPFSTLPFRPPGISIKPLYSPKFLILPPRRYRCVADSSNNHHHHDHQGHHHHHDHQDHQGHHHHHHHHHHHHSHGIDGANLTGPQKAVIAFAKATRWMDLADILREHLHLCCFSTVLFVAAAICPHTLPKPLVRPFQNSLIFIAFPLVGVSASLDALIEISSGKVNIHVLMAMAAFASIFMGNSLEGGLLLAMFNLAHIAEEHFTSRSMVDVRELKENNPDFALVLDTKDDKLPNTFDLAYKRIPVHDVTVGSYILVGAGESVPVDCEVFQGNATITIEHLTGEVKPLEAKVGDRIPGGARNLDGRIIVKVTKTWKESTLSKIVQLTEEAQSNKPKLQRWLDEFGERYSQVVVVLSIAIAVIGPLLFKWPFISTSACRGSIYRALGLMVAASPCALAVAPLAYAIAISSCAKKGILLKGGHVLDALASCRTIAFDKTGTLTTGGLVFKAIEPIYGHHVRNNVSKFSSCCIPTCEKEALAVAAAMEKGTTHPIGRAVVDHSEGKDLPSISVESFEYFPGRGLTATVNNIESGRESAKLLKASLGSIDFITSFCQSEDESEKIKEAVNTSSYGSEYVHAALSVNQKVTLIHLEDRPRPGVFNVIQELQDEAKFRVMMLTGDHESSARRVASAVGINEFHCNLKPEDKLSHVKDTSRDMGGGLIMVGEGINDAPALAAATVGIVLAHRASATAIAVADILLLRENISAVPFCIAKSRQTTSLIKQNVALALTSIVMASLPSVLGFLPLWLTVLLHEGGTLLVCLNSVRALNEPSWSWKHDILHLISQIKSSLLSLKQISRAQTVS* 827
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g2471 826 CDD P-type_ATPase_HM 135 789 - -
Pvu3g2471 826 Pfam E1-E2 ATPase 265 437 - -
Pvu3g2471 826 SFLD C1.7: P-type atpase like 439 740 - -
Pvu3g2471 826 SUPERFAMILY HAD-like 455 787 IPR036412 -
Pvu3g2471 826 TIGRFAM ATPase-IB_hvy: heavy metal translocating P-type ATPase 191 789 IPR027256 GO:0006812|GO:0016021|GO:0019829
Pvu3g2471 826 Gene3D - 450 738 IPR023214 -
Pvu3g2471 826 ProSitePatterns E1-E2 ATPases phosphorylation site. 459 465 IPR018303 -
Pvu3g2471 826 SUPERFAMILY Calcium ATPase, transmembrane domain M 193 497 IPR023298 -
Pvu3g2471 826 PRINTS P-type cation-transporting ATPase superfamily signature 101 115 - -
Pvu3g2471 826 PRINTS P-type cation-transporting ATPase superfamily signature 610 621 - -
Pvu3g2471 826 PRINTS P-type cation-transporting ATPase superfamily signature 633 643 - -
Pvu3g2471 826 PRINTS P-type cation-transporting ATPase superfamily signature 687 706 - -
Pvu3g2471 826 PRINTS P-type cation-transporting ATPase superfamily signature 711 723 - -
Pvu3g2471 826 SFLD p-type atpase 439 740 IPR044492 -
Pvu3g2471 826 SUPERFAMILY Calcium ATPase, transduction domain A 265 350 IPR008250 -
Pvu3g2471 826 MobiDBLite consensus disorder prediction 59 102 - -
Pvu3g2471 826 Pfam haloacid dehalogenase-like hydrolase 454 700 - -
Pvu3g2471 826 Gene3D - 468 618 IPR023299 GO:0000166
Pvu3g2471 826 PANTHER PROBABLE CADMIUM/ZINC-TRANSPORTING ATPASE HMA1 65 817 - -
Pvu3g2471 826 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 567 767 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Pvu3g2471 826 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 264 482 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Pvu3g2471 826 MobiDBLite consensus disorder prediction 68 98 - -
Pvu3g2471 826 Gene3D - 230 355 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g2471 Pvu-Chr3 46285475 46301905 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g2471 91 811 Primary Pumps ATPases AT4G37270 75.728 0.0 1094
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g2471 K01534 - gmx:100776309 1378.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g2471 3 46285475 46301905 Pvu3g2471 3 46285475 46301905 ECH