Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g2465 ATGGAGATTCCTAAGCTCCACATAATTCAACACTCTCGCTGTATAGCACTTCTTTTCCTTCTTCAGTTCTCATCACTGCACTTCCCCTCCCTCGGCTACAACGTCCCAGATAAGTACTTTATCAGTTGTGGGTCAGACAACAGTGTTAACGAAAGTGGCAAGGTTTACGCTGCTGAGTCAAAACTTGATGCCAGTTTTAGCGGCAGTAATACCGAAAGGAATCAGTCATCGGTGCCTTCTCCTCTTTACCAAACAGCAAGGATTTTTCGAAGGGAATCTTGGTACAAGTTCAACATCGATTTAAAGGGCACCTACCTGCTACGCCTCCATTTCTTCCCTTTCTCTTCCCCCAGTAATCTTTCCTCGGCCAGGTTCAACGTTTCAGTTCCTGGTTTCTGGTTGTTGCAAAATTTTAATGGTACAAATGATACCAATAGCAACTCGGCTTCAGTTAAAGAATTTTTCATGGAAATCAGTCCCCCCACCTTCAGAGTAACTTTCAGACCTCTGGAATCATCGTTTGCGTTTGTGAATGCCATAGAACTGTTCGTACTACCCCTCCATCTGATATCTGATAAGGTGTCGTTTTTCAAACCTATTGGGGGTACAACTCCTTATAGCGGAGGTTTGTACTCTCGGGTGTTGGAGACCAAACATAGGCTTAATGTTGGTGGTCAACATACCAAAGATCTCTTATTGAGAAACTGGATTCCAGATGATATTCATCTAATGTATACAGGAAACGCCAAGAATCGTTCCCCTTACAATGGTGAAATCGGGTACCATGTAGATGATGACTCCGATGGTCCAAACGCAGCTAGATATACTGCGCCAACTCAGGTGTACGGAACTGCTAAGGAAACTAACCTCTCTGTCAATGCCACAGACTTTGGACTTTTCAACATAACATGGGCTCTTCCGGTGGACAACAAAACAGATCATTTCCTTCGGCTTCACTTCTGTGACTATTTGAGTTCACAAGGTGGCCTTACATACTTCGAACTTTCCATTTATGACGCCCTTGTCATGCAGGTAAATAGTGACGGAAACGTGTCTAACGAGTTGCCTGCCCCTTATTATTATGATTTCGTGGTGAACTCTGATGACAATGGACATATTAAGGTCAGCCTAACACCTAATAGAACCGCTTTAAATCCAAGTGCATTTTTAAACGGGCTAGAAATAATGAAAGTGATTGAACCATCAAATTCTGTCCCCCCTGACTTGGAAGAAGCCGATTCCAATCATCGTCTTCCTTTGTTGCTGGGTTCAGTTCTCGGTGGTTTAGTCTTGGCTATTGTTGTAGTGCTACTTGGATTTCTTTGGCGTTTTAAAATGAGGAAGGAAAAGCCCGTTGAGAATTCGGACTGGTTGCCAATCCCCGTTAATGCTGGAGGAAGTTCTCACAGCAGATTGACTGATATAACCAGTCACGGGTCTCCCCTTCCCAACATAAACCTAGGGCTCAAAATTCCCTTGATTGATCTTCAACTTGCAACAAAGAATTTCCACGAAAGTCAGCTGATTGGCAAGGGTGGTTTTGGCAACGTCTACAAGGGAGTCCTCAAGAATGGCATGACAGTGGCTGTGAAAAGAAGCCAGCCAGGGTCAGGTCAAGGCCTTCCAGAATTTCAGACAGAGATTATGGTTTTGTCCAAGATTCGCCACAGGCACCTGGTTTCCTTAATTGGGTATTGTGATGAGAGGTTCGAGATGATTCTGGTCTATGAATACATGGAAAAAGGAACCCTAAGGGACCATTTGTATAACACAAAGTTTCCAACCTTGTCCTGGAAGGTGAGGCTTCAAATTTGCATTGATTCTGCCAGGGGTCTTCATTACCTTCATAAAGGAGCAGCTGGGGGAATCATTCACCGTGATGTAAAGTCCACAAACATATTGCTTGATGAGAACCATGTTGCTAAAGTTGCTGATTTTGGTCTTTCAAGGTCAGGTCCTCTTGATACTCAACCGTATGTCAGCACTGGTGTTAAAGGCACTTTTGGGTATCTTGATCCTGAGTATTTCAGGTCTCAACAGCTGACAGAAAAATCTGATGTGTATTCATTTGGAGTAGTTCTTTTGGAAGTGTTGTGTGCAAGAGCAGTGATTGACCCATCTCTTCCAAGAGATCAGATAAACTTGGCGGAATGGGGATTGCTTTGCAAAAACAAGGGGACACTCCAAGAGATCATCGATCCTTCCATCAAGGATCAAATTGATCAAAACTCACTCAGAAAATTTAGTGAGACGATAGAAAAATGCTTGCAAGAAGATGGTTCTGATAGGCCAACCATGGGTGATGTGTTGTGGGACTTGGAGTATGCGGTGCAGCTTCAGAGAGGTGCAAATGCAATACAGAGAGAGCCGTATGAGGATAGTTCTAGCAATGTTTCTGCATCATTTCAACTGCCCAATGTTCGGCGCCTTCCTTCACTCTCCACACTGAGTGAAGCCGATGATACCATTGTGAGGCATGATGAATCCGATAGTGCTGTGGATTACGTTTTCTCCCAGTTGAAGATTGATGATGCCAGATAG 2541 0.4384 MEIPKLHIIQHSRCIALLFLLQFSSLHFPSLGYNVPDKYFISCGSDNSVNESGKVYAAESKLDASFSGSNTERNQSSVPSPLYQTARIFRRESWYKFNIDLKGTYLLRLHFFPFSSPSNLSSARFNVSVPGFWLLQNFNGTNDTNSNSASVKEFFMEISPPTFRVTFRPLESSFAFVNAIELFVLPLHLISDKVSFFKPIGGTTPYSGGLYSRVLETKHRLNVGGQHTKDLLLRNWIPDDIHLMYTGNAKNRSPYNGEIGYHVDDDSDGPNAARYTAPTQVYGTAKETNLSVNATDFGLFNITWALPVDNKTDHFLRLHFCDYLSSQGGLTYFELSIYDALVMQVNSDGNVSNELPAPYYYDFVVNSDDNGHIKVSLTPNRTALNPSAFLNGLEIMKVIEPSNSVPPDLEEADSNHRLPLLLGSVLGGLVLAIVVVLLGFLWRFKMRKEKPVENSDWLPIPVNAGGSSHSRLTDITSHGSPLPNINLGLKIPLIDLQLATKNFHESQLIGKGGFGNVYKGVLKNGMTVAVKRSQPGSGQGLPEFQTEIMVLSKIRHRHLVSLIGYCDERFEMILVYEYMEKGTLRDHLYNTKFPTLSWKVRLQICIDSARGLHYLHKGAAGGIIHRDVKSTNILLDENHVAKVADFGLSRSGPLDTQPYVSTGVKGTFGYLDPEYFRSQQLTEKSDVYSFGVVLLEVLCARAVIDPSLPRDQINLAEWGLLCKNKGTLQEIIDPSIKDQIDQNSLRKFSETIEKCLQEDGSDRPTMGDVLWDLEYAVQLQRGANAIQREPYEDSSSNVSASFQLPNVRRLPSLSTLSEADDTIVRHDESDSAVDYVFSQLKIDDAR* 847
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g2465 846 SMART serkin_6 503 776 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu3g2465 846 ProSiteProfiles Protein kinase domain profile. 503 776 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu3g2465 846 SUPERFAMILY Protein kinase-like (PK-like) 480 774 IPR011009 -
Pvu3g2465 846 Gene3D Transferase(Phosphotransferase) domain 1 579 797 - -
Pvu3g2465 846 PANTHER BNAC03G27170D PROTEIN 30 809 - -
Pvu3g2465 846 ProSitePatterns Protein kinases ATP-binding region signature. 509 531 IPR017441 GO:0005524
Pvu3g2465 846 Gene3D - 215 399 - -
Pvu3g2465 846 Gene3D - 38 184 - -
Pvu3g2465 846 CDD STKc_IRAK 509 774 - -
Pvu3g2465 846 PANTHER OS07G0166700 PROTEIN 30 809 IPR045272 GO:0004714|GO:0006468
Pvu3g2465 846 Pfam Malectin-like domain 41 398 IPR024788 -
Pvu3g2465 846 Gene3D Phosphorylase Kinase; domain 1 471 578 - -
Pvu3g2465 846 ProSitePatterns Serine/Threonine protein kinases active-site signature. 623 635 IPR008271 GO:0004672|GO:0006468
Pvu3g2465 846 Pfam Protein tyrosine and serine/threonine kinase 506 770 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g2465 Pvu-Chr3 46233398 46235938 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g2465 14 846 Receptor kinase-like Gene Family AT2G23200 43.611 0.0 610
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Pvu3g2465 Malectin_like 2.2e-22 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g2465 - - gmx:100789555 1133.63