Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g2464 ATTGAATCATCAAATGATGTCCCCCGTGACATGGACGAACCCGATTCCAATCATCATCCTTTTCCTGTGGTTCTGGGTTCAGTTCTCGGTGGTTTAGCCTTGGCTTTTGTTGTGGTGCTACTTGGCTTTCTTTTGCGTTTTAAAATGAGGAAGGAAAAGCCCGTTGGGAATTCGGACTGGTTGTCAGTCCTCGTTAATGCTGGAGGAAGTTCTCACAGCAGATTGACTGATATATCCAGTCACGGCTCTGCCCTTCCCAACATAAACCTAGGGCTCAAAATTCCCTTGATTGATCTTCAACTTGCAACAAAGAATTTCCACGAAAGTCAGCTGATTGGCGAGGGTGGTTTTGGCAACGTCTACAAGGGAGTCCTCAAGAATGGCATGACAGTGGCTGTGAAAAGAAGCCAGCCAGGGTCAGGTCAAGGCCTTCCAGAATTTCAGACAGAGATTATGGTTTTGTCCAAGATTCGCCACAGGCACCTGGTTTCCTTAATTGGGTATTGTGATGAGAGGTTGGAGATGATTCTGGTCTATGAATACATGGAAAAAGGAACCCTAAGGGACCATTTGTATAACACAAAGTTTCCAACCTTGTCCTGGAAGGCGAGGCTTCAAATTTGCATTGATTCTGCCAGGGGTCTTCATTACCTTCACAAAGGAGCAGCTGGGGGAATCATTCACCGTGATGTGAAGTCCACAAACATATTGCTTGATGAGAACCATGTCGCTAAAGTTGCTGATTTTGGTCTTTCAAGGTCAGGTCCTCTTGGTACTGAATCGTATGTCACCACTGGTGTTAAAGGCACTTTTGGGTATCTTGATCTTGAGTATTTCAGGTCGCAACACCTGACAGAAAAATCTGATGTCTACTCATTTGGGGTAGTTCTTTTGGAAGTTTTATGTGCAAGAGCAGCGATTGACCCATCTCTTCCAAGAGATCAGATAAACTTGGCGGAATGGGGATTGCTTTGCAAAAACAAGGGGACACTCCAAGAGATCATCGATCCTTCCATCAAGGATCAAATTGATCAAAACTCACTCAGAAAATTTAGTGAGACGATAGAAAAATGCTTGCAAGAAAATGGTTCTGATAGGCCAACCATGGGTGATGTGTTATGGAACTTGGAGTATGCGGTGCAGCTTCAGAGAGGTGCAAATTCAATGCAGAGAGACCCGTATGAGAATAGTTCTAGCAGTGTTTCTACATCACTTCAACTGCCAAATGTTCGGCGTCTTCCTTCACTCTCCACACTGAGTGAAGCCGATGATATAATTGTGAGGCATGATGAATCCGATAGTGCTGTGGATTACGTTTTCTCCCAGTTGAAGATTGATGATGCCAGTTAG 1350 0.4444 IESSNDVPRDMDEPDSNHHPFPVVLGSVLGGLALAFVVVLLGFLLRFKMRKEKPVGNSDWLSVLVNAGGSSHSRLTDISSHGSALPNINLGLKIPLIDLQLATKNFHESQLIGEGGFGNVYKGVLKNGMTVAVKRSQPGSGQGLPEFQTEIMVLSKIRHRHLVSLIGYCDERLEMILVYEYMEKGTLRDHLYNTKFPTLSWKARLQICIDSARGLHYLHKGAAGGIIHRDVKSTNILLDENHVAKVADFGLSRSGPLGTESYVTTGVKGTFGYLDLEYFRSQHLTEKSDVYSFGVVLLEVLCARAAIDPSLPRDQINLAEWGLLCKNKGTLQEIIDPSIKDQIDQNSLRKFSETIEKCLQENGSDRPTMGDVLWNLEYAVQLQRGANSMQRDPYENSSSSVSTSLQLPNVRRLPSLSTLSEADDIIVRHDESDSAVDYVFSQLKIDDAS* 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g2464 449 Gene3D Phosphorylase Kinase; domain 1 71 181 - -
Pvu3g2464 449 SMART serkin_6 106 379 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu3g2464 449 SUPERFAMILY Protein kinase-like (PK-like) 94 375 IPR011009 -
Pvu3g2464 449 Pfam Protein tyrosine and serine/threonine kinase 109 373 IPR001245 GO:0004672|GO:0006468
Pvu3g2464 449 CDD STKc_IRAK 112 377 - -
Pvu3g2464 449 ProSitePatterns Protein kinases ATP-binding region signature. 112 134 IPR017441 GO:0005524
Pvu3g2464 449 Gene3D Transferase(Phosphotransferase) domain 1 182 402 - -
Pvu3g2464 449 PANTHER BNAC03G27170D PROTEIN 17 411 - -
Pvu3g2464 449 PANTHER OS07G0166700 PROTEIN 17 411 IPR045272 GO:0004714|GO:0006468
Pvu3g2464 449 ProSitePatterns Serine/Threonine protein kinases active-site signature. 226 238 IPR008271 GO:0004672|GO:0006468
Pvu3g2464 449 ProSiteProfiles Protein kinase domain profile. 106 379 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g2464 Pvu-Chr3 46228419 46229770 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g2464 34 448 Receptor kinase-like Gene Family AT2G23200 54.502 9.27e-148 439
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Pvu3g2464 PK_Tyr_Ser-Thr 2e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g2464 - - gmx:100305412 728.398