Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g2462 AGGTTGGAGATGATTCTGGTCTATGAATACATGGAAAAAGGAACCCTAAGGGACCATTTGTATAACACAAAGTTTCCAACCTTGTCCTGGAAGGCGAGGCTTCAAATTTGCATTGATTCTGCCAGGGGTCTTCATTACCTTCACAAAGGAGCAGCTGGGGGAATCATTCACCGTGATGTGAAGTCCACAAACATATTGCTTGATGAGAACCATGTCGCTAAAGTTGCTGATTTTGGTCTTTCAAGGTCAGGTCCTCTTGGTACTGAATCGTATGTCACCACTGGTGTTAAAGGCACTTTTGGGTATCTTGATCTTGAGTATTTCAGGTCGCAACAGCTGACAGAAAAATCTGATGTCTACTCATTTGGGGTAGTTCTTTTGGAAGTTTTATGTGCAAGAGCGGCGATTGACCCATCTCTTCCAAGAGATCAGATAAACTTGGCGGAATGGGGATTGCTTTGCAAAAACAAGGGGACACTCCAAGAGATCATCGATCCTTCCATCAAGGATCAAATTGATCAAAACTCACTCAGAAAATTTAGTGAGACGATAGAAAAATGCTTGCAAGAAGATGGTTCTGATAGGCCAACCATGGGTGATGTGTTGTGGGACTTGGAGTATGCGGTGCAGCTTCAGAGAGGTGCAAATGCAATACAGAGAGAGCCGTATGAGGATAGTTCTAGCAGTGTTTCTGCATCATTTCAACTGCCCAATGTTCGGCGTCTTCCTTCACTCTCCACACTGAGTGAAGCCGATGATACCATTGTGAGGAATGATGAATCCGATAGTGCTGTGGATTACGTTTTCTCCCAGTTGAAGATTGATGATGCCAGATAG 837 0.4397 RLEMILVYEYMEKGTLRDHLYNTKFPTLSWKARLQICIDSARGLHYLHKGAAGGIIHRDVKSTNILLDENHVAKVADFGLSRSGPLGTESYVTTGVKGTFGYLDLEYFRSQQLTEKSDVYSFGVVLLEVLCARAAIDPSLPRDQINLAEWGLLCKNKGTLQEIIDPSIKDQIDQNSLRKFSETIEKCLQEDGSDRPTMGDVLWDLEYAVQLQRGANAIQREPYEDSSSSVSASFQLPNVRRLPSLSTLSEADDTIVRNDESDSAVDYVFSQLKIDDAR* 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g2462 278 SMART serkin_6 3 208 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu3g2462 278 SUPERFAMILY Protein kinase-like (PK-like) 4 203 IPR011009 -
Pvu3g2462 278 ProSitePatterns Serine/Threonine protein kinases active-site signature. 55 67 IPR008271 GO:0004672|GO:0006468
Pvu3g2462 278 PANTHER OS07G0166700 PROTEIN 2 241 IPR045272 GO:0004714|GO:0006468
Pvu3g2462 278 Pfam Protein tyrosine and serine/threonine kinase 3 202 IPR001245 GO:0004672|GO:0006468
Pvu3g2462 278 PANTHER BNAC03G27170D PROTEIN 2 241 - -
Pvu3g2462 278 Gene3D Transferase(Phosphotransferase) domain 1 11 230 - -
Pvu3g2462 278 ProSiteProfiles Protein kinase domain profile. 1 208 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g2462 Pvu-Chr3 46221066 46221996 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g2462 3 278 Receptor kinase-like Gene Family AT2G23200 56.738 3.17e-102 315
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Pvu3g2462 PK_Tyr_Ser-Thr 2.4e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g2462 - - gmx:100305412 504.212