Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g2431 ATGACGCAATTCACACCCCAACTGCCTCCCTTCCACCAAATCACACCCCTCCCCAACCCTACCATGAACAAAAACCAAATCCCTAGGACTAGGCCCTGGCCTGCAGGCTTTCCTACCTCCAAGGCCTTAACCAACTTCGGAGACGCTAACTGCATGGAACAGTTACTTGTTCACTGTGCCAACGCCATTCAAACAAACGACGTAACCCTCGCACAACAAATCCTTTGGGTCCTCAACAACATAGCCTCCCCCGACGGCGACTCCAATCAACGTCTTGCCTCCAGCTTCCTCCGCGCTCTCACCGCACGTGCCGCCCAAACCAAGATGCTCGTCGCTGTAGCCGATCACGACCGCACCAACCTCTCCATAGACACCCACAAATTCTCCGTCATCGAGCTCGCCAACTTCGTCGACCTAACTCCCTGGCACCGCTTCGGCTTCACCGCCGCCAACGCTGCCGTCCTAGCAGCCACCGAGGGCTTCTCCGTCATCCACATCGTCGACCTGAGCCTCACGCATTGCATGCAGATTCCCACGCTCATCGACGCCATCGCCAGCCGCCACGAGGTCACTCCCCTCATTAAACTTACTGTTGCCGATGCCACCTGCAGAGACATCCCTCCTATGCTCGACCTCTCCTACGACGAACTCGGCGCCAAGTTGATCAATTTCGCAAGGTCCAGAAACGTCGTCATGGAATTCAGAGTGGTTTCTTCCACTTACCAAGACGGCTTCGCGGGTTTGATCGAACAGTTAAGAGTGCAACAACAACATTTTGTTTACGCAGCAGAACCTCGCTCCTGTGAGGCTTTGGTTATCAACTGTCACATGATGCTTCACTACATCCCCGACGAATCCCTACACGCAATTCCTGAAACTGACTTGGCCTCTTTGCTCTACGATTCTTCTTCTGCTGCTGCTTCTTCTGCTGTTAGTGTTACTTCCACTTCCTCGCTGCGATCCTTGTTCCTTAAATCCCTGCGGGGTTTGGATCCAACGGTTGTAATCTTGGTAGATGAAGATGCGGATTTGACATCCAATAACTTGGTTTGCAGGCTAAGATCTGCGTTTAACTATCTATGGATACCTTACGACACTGTGGACACGTTCCTTCCACGAGGGAGCAAGCAAAGACAGTGGTACGAAGCAGACATTTGCTGGAAGATTGAGAACGTGATAGCGCACGAAGGGATTGAGAGGGTGGAGAGGGTTGAGCCTAAGACTAGGTGGGAGCAGCGAATGAAAAACGCGAACTTTCAAGGGGTGGCTTTCAGTGATGACTCTGTTGCGGAGGTGAAGGGCATGCTTGATGAGCATGCTGCGGGGTGGGGATTGAAGAGGGAAGATGAACACATTCTCCTCACTTGGAAAGGACACAACGTCGTCTTTGCCTCTGCTTGGTTACCTGCTTGA 1413 0.5258 MTQFTPQLPPFHQITPLPNPTMNKNQIPRTRPWPAGFPTSKALTNFGDANCMEQLLVHCANAIQTNDVTLAQQILWVLNNIASPDGDSNQRLASSFLRALTARAAQTKMLVAVADHDRTNLSIDTHKFSVIELANFVDLTPWHRFGFTAANAAVLAATEGFSVIHIVDLSLTHCMQIPTLIDAIASRHEVTPLIKLTVADATCRDIPPMLDLSYDELGAKLINFARSRNVVMEFRVVSSTYQDGFAGLIEQLRVQQQHFVYAAEPRSCEALVINCHMMLHYIPDESLHAIPETDLASLLYDSSSAAASSAVSVTSTSSLRSLFLKSLRGLDPTVVILVDEDADLTSNNLVCRLRSAFNYLWIPYDTVDTFLPRGSKQRQWYEADICWKIENVIAHEGIERVERVEPKTRWEQRMKNANFQGVAFSDDSVAEVKGMLDEHAAGWGLKREDEHILLTWKGHNVVFASAWLPA* 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g2431 470 PANTHER SCARECROW-LIKE PROTEIN 32 28 468 - -
Pvu3g2431 470 Pfam GRAS domain family 52 467 IPR005202 -
Pvu3g2431 470 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 28 468 IPR005202 -
Pvu3g2431 470 ProSiteProfiles GRAS family profile. 43 468 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g2431 Pvu-Chr3 45891832 45893752 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g2431 34 469 GRAS Transcription Factor Family AT3G49950 56.278 4.09e-174 493
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Pvu3g2431 GRAS 4.7e-88 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g2431 - - gmx:100814364 749.584
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g2431 3 45891832 45893752 Pvu3g2431 3 45891832 45893752 ECH