Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g2418 ATGGATACCTTGTTTAGGCTAGTAAGTTTTCAACAGCAACAACACCATCAACCACAACCCGATCCATCCCTTAACTCCACCACCAGCAGAACTTCTAGCAGTTCCAGATCCTCCCGACAAAACTACTACCATTACTCCCACCAAGAAGACGAAGAATGCTTCAACTTTTACATGGATGAAGAAGACTTATCCTCGTCTTCTTCCAAACACTACTACCCTTACCACAACGTATCCACCACCACCACTACCACCACCACAACCAACACCTTCAGCCCCACCACCAACACCGATTACTCCTACTCCTTCTCTCCCACCCCTCCCCTCCCCGACTTCAACTTCCAATTCTCCCCCAACTGGTCCCACAACCTCCTCCTCGAAACAGCACGCTCCTTCGCCGACAACAATAGCACGCGCTTCCATCACCTCCTCTGGATGCTCAACGAACTTAGCTCCCCATACGGCGACACCGATCAAAAGCTTGCCGCTTATTTCCTCCAAGCTCTGTTCAGCCGCGTCACCGACGCAGGAGACCGAACCTACCGAACCTTAGCCTCGGCATCGGAGAAAACATGCTCCTTCGAGTCAACGAGGAAGACGGTGTTGAAATTCCAAGAAGTCAGCCCCTGGACAACATTCGGACACGTGGCGTCCAACGGCGCCATCTTAGAAGCCTTAGAAGGAAACCCCAAATTGCACATACTTGACATCAGCAACACCTATTGCACCCAATGGCCAACACTTCTAGAAGCATTGGCAACTCGAACCGACGAAACACCGCACCTCAGGTTAACCACGGTCGTCACCGGGAGAACCGGTAACTCCGTGCAGCGCGTCATGAAGGAAATCGGAACAAGAATGGAGAAGTTCGCGCGACTCATGGGCGTTCCGTTCAAGTTCAACGTCGTTCATCACGCCGGCGATCTCTCCGAACTCAATTTCTCTGAACTCAACCTCAAAGACGACGAGGCCCTGGCCATCAACTGCGTGAACGCGCTGCATTCGGTTTCCGCAGCGGGGAACAGCCGCGACGCGTTGATATCGTCGTTGCAAGGGTTGCAGCCGAGGATCGTAACGGTGGTGGAGGAGGAGGCGGATTTGGACGTGGGAATCGAGGGCTACGAGTTCGTTAGAGGTTTCGAGGAGTGTTTGAGGTGGTTTAGGGTTTACTTCGAGGCGCTGGACGAGAGTTTCGTGAAGACGTGCAACGAGAGGCTGATGCTCGAGCGCGCGGCAGGGAGGGCGGTGGTGGACCTGGTGGCGTGCTCGCCAGCGGATTCCATTGAGCGTCGGGAGACGGCGGCGCGGTGGGGAACGCGGCTGCATGGGGGAGGGCTAAGCGCGGTGCCGTTCAGCGAAGAGGTTTGCGACGACGTTAGGGCGCTGTTGAGGAGGTACAAGGAGGGTTGGTCGATGGTGCCGTGCTCCGACACCGGAATATTCCTTTCGTGGAGGGAAACTCCGGTGGTGTGGGCCAGTGCATGGAGGCCTTAA 1491 0.554 MDTLFRLVSFQQQQHHQPQPDPSLNSTTSRTSSSSRSSRQNYYHYSHQEDEECFNFYMDEEDLSSSSSKHYYPYHNVSTTTTTTTTTNTFSPTTNTDYSYSFSPTPPLPDFNFQFSPNWSHNLLLETARSFADNNSTRFHHLLWMLNELSSPYGDTDQKLAAYFLQALFSRVTDAGDRTYRTLASASEKTCSFESTRKTVLKFQEVSPWTTFGHVASNGAILEALEGNPKLHILDISNTYCTQWPTLLEALATRTDETPHLRLTTVVTGRTGNSVQRVMKEIGTRMEKFARLMGVPFKFNVVHHAGDLSELNFSELNLKDDEALAINCVNALHSVSAAGNSRDALISSLQGLQPRIVTVVEEEADLDVGIEGYEFVRGFEECLRWFRVYFEALDESFVKTCNERLMLERAAGRAVVDLVACSPADSIERRETAARWGTRLHGGGLSAVPFSEEVCDDVRALLRRYKEGWSMVPCSDTGIFLSWRETPVVWASAWRP* 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g2418 496 MobiDBLite consensus disorder prediction 8 42 - -
Pvu3g2418 496 ProSiteProfiles GRAS family profile. 111 495 IPR005202 -
Pvu3g2418 496 Pfam GRAS domain family 122 495 IPR005202 -
Pvu3g2418 496 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 1 495 IPR005202 -
Pvu3g2418 496 PANTHER PROTEIN SHORT-ROOT 1 495 IPR030019 GO:0003700|GO:0005634|GO:0008356|GO:0009956|GO:0043565|GO:0048366
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g2418 Pvu-Chr3 45719832 45721804 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g2418 1 496 GRAS Transcription Factor Family AT4G37650 59.218 0.0 576
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Pvu3g2418 GRAS 1e-100 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g2418 - - gmx:100778524 834.328
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g2418 3 45719832 45721804 Pvu3g2418 3 45719832 45721804 ECH
Pvu2g0109 2 1218350 1220447 Pvu3g2418 3 45719832 45721804 PCT