Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g2412 ATGTCTGTGCAGACCAAGATGGTGTTTGTTGTTGTTCTGTCTGCAGAAATTGTTGGTAGTCCTTGTTTAGGTGTCACTCTCAAGGATATAGCCTTTCTTCATCACCTGGGAATCCGGTTTGTTCTCGTTCCGGGGACCCATGTGCAAATTGACAATCTTTTGCGTGAGAGAGGGAGAGAACCTAAATATGTTGGTCCATATAGGGTAACTGATGATGAGTCTCTAGCAGCTGCAATGGAAGCAGCTGGGAGAATAAGATTGATGATTGAAGCAAAGCTTTCGCCTGGGCCCTCCATTTGCAATATTCGTCGACATGGTGACAATAGCCGTTTGCATGAAGTTGGTGTCAGTGTTGCAAGTGGAAACTTTCTTGCAGCCAAGAGAAGAGGGGTTGTCAAAGGAGTTGATTTTGGGTCAACTGGGGAGGTTAAAAAGGTCGACGTTTCTCGCATGCGTGAGAGGCTTGATGGCGACTGCATTGTTATTTTAAGCAACTTGGGTTACTCCAGCTCTGGACAAGTATTAAATTGCAATGCCTATGAAGTTGCAACAGCTTGTGCGTTGGCCATAGGAGCAGACAAGCTTATATGCATTACAGATTGTCCCATACTGGATGAAAGTGGACACCTTATTCGGTTCTTAACTCTTCAAGAGGCAGACATGCTAATTCGTAATCGGGTTGAACAAAGTGAAACAGCTGCTAACTATGTGAAAGCTATTGCCGAAGGAAATTTCAACTCTCTTAAAAAATTTAATGGGGCTCCCCAGAATGGAAAACCATCTTCAGAATGTCATATTCCAACCTTTCATAATGGTGTTGGTTCTGGCAATGGGAATGGCCTTTGGTCTGGGGAGCAGGGTTTTGCTATAGGAGGTCAGGAGTCTCTAAGTCGAACTAATAGTTACCTGTCAGAGCTGGCTGCTGCAGCTTTCGTTTGCAAAGGTGGTGTTCAAAGAGTTCATTTGTTGGATGGCACTATTAGTGGAGTTCTATTGTTGGAATTGTTCAAGAGAGATGGGATGGGGACAATGGTGGCTAGTGACCTTTATGAAGGCACCCGGATGGCTCAAGTAACAGATATTTCTGGAATAAAACAACTCATCCAGCCTTTACAGGAGTCTGGCATATTAGTTATGCGGACTGATGAAGAGCTGCTTCAATCATTAGGCTCCTTCATTGTTGTGGAAAGAGAAGGTCAAATAATTGCTTGCGCTGCACTTTTTCCTTTCTTTGAAGAGAAGTGTGGAGAGGTTGCAGCAATTGCAGTATCCCCTGATTGTAGAGGCCAAGGACAGGGAGACAAATTACTTGATTATATAGAGAAGAAGGCATCATATCTTGAATTTGAAATGCTTTTCTTGCTTACAACTCGTACAGCAGATTGGTTTGTGAGGCGGGGATTTTCAGAATGTTCAATTGATTTTATTCCTGAGAAGAAAAGGAAAAGGATTAATCTATCCCGCAAGTCCAAGTATTACATGAAGAAGCTTCTACCTAATAAGAGTGGAATTACTTTTAGTAGCAAATTTACTTCCCATTAG 1542 0.4274 MSVQTKMVFVVVLSAEIVGSPCLGVTLKDIAFLHHLGIRFVLVPGTHVQIDNLLRERGREPKYVGPYRVTDDESLAAAMEAAGRIRLMIEAKLSPGPSICNIRRHGDNSRLHEVGVSVASGNFLAAKRRGVVKGVDFGSTGEVKKVDVSRMRERLDGDCIVILSNLGYSSSGQVLNCNAYEVATACALAIGADKLICITDCPILDESGHLIRFLTLQEADMLIRNRVEQSETAANYVKAIAEGNFNSLKKFNGAPQNGKPSSECHIPTFHNGVGSGNGNGLWSGEQGFAIGGQESLSRTNSYLSELAAAAFVCKGGVQRVHLLDGTISGVLLLELFKRDGMGTMVASDLYEGTRMAQVTDISGIKQLIQPLQESGILVMRTDEELLQSLGSFIVVEREGQIIACAALFPFFEEKCGEVAAIAVSPDCRGQGQGDKLLDYIEKKASYLEFEMLFLLTTRTADWFVRRGFSECSIDFIPEKKRKRINLSRKSKYYMKKLLPNKSGITFSSKFTSH* 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g2412 513 SUPERFAMILY Carbamate kinase-like 298 347 IPR036393 -
Pvu3g2412 513 Hamap Amino-acid acetyltransferase [argA]. 1 497 IPR010167 GO:0004042|GO:0005737|GO:0006526
Pvu3g2412 513 CDD NAT_SF 392 454 - -
Pvu3g2412 513 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 351 499 IPR000182 GO:0016407
Pvu3g2412 513 CDD AAK_NAGS-ABP 9 345 IPR033719 -
Pvu3g2412 513 PANTHER AMINO-ACID ACETYLTRANSFERASE 5 504 IPR010167 GO:0004042|GO:0005737|GO:0006526
Pvu3g2412 513 Gene3D - 3 350 IPR036393 -
Pvu3g2412 513 Gene3D - 351 497 - -
Pvu3g2412 513 TIGRFAM N-Ac-Glu-synth: amino-acid N-acetyltransferase 306 497 IPR010167 GO:0004042|GO:0005737|GO:0006526
Pvu3g2412 513 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 354 502 IPR016181 -
Pvu3g2412 513 SUPERFAMILY Carbamate kinase-like 6 226 IPR036393 -
Pvu3g2412 513 PIRSF ArgA 2 497 IPR010167 GO:0004042|GO:0005737|GO:0006526
Pvu3g2412 513 Pfam Acetyltransferase (GNAT) family 390 454 IPR000182 GO:0016407
Pvu3g2412 513 Pfam Amino acid kinase family 27 221 IPR001048 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g2412 Pvu-Chr3 45663486 45673405 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Pvu3g2412 AA_kinase 6.3e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g2412 K14682 - gmx:100800925 886.715
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu2g0104 2 1174044 1185837 Pvu3g2412 3 45663486 45673405 PCT